整合素识别中红吻合酶和紫组蛋白的结构和功能差异及其生物学意义。

IF 3.2 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yi-Chun Chen, Chun-Hao Huang, Yao-Tsung Chang, Chiu-Yueh Chen, Jia-Hau Shiu, Chun-Ho Cheng, Yu-Fang Su, Woei-Jer Chuang
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引用次数: 0

摘要

Rhodostomin (Rho)和Echistatin (Ech)是含RGD的崩解素,它们具有不同的大小、二硫键模式和RGD环和c -末端的氨基酸序列。细胞粘附分析表明,Rho对整合素αvβ3、α5β1、αIIbβ3和αvβ5的抑制活性分别比Ech低5.2倍、18.9倍、2.2倍和1.7倍。Rho对整合素αvβ6的抑制活性比Ech高8.8倍。将Ech的RGD环和c端序列交换到Rho的RGD环和c端序列不能增加其整合素的抑制活性。有趣的是,Ech突变成Rho的RGD环PRGDMP序列和c端YH序列导致抑制整合素αvβ6的活性提高8.2倍。对Rho和Ech的结构分析表明,它们在RGD环中具有相似的构象,而在c端区域具有不同的构象。分子对接发现,除了RGD环外,Rho和Ech的c端区域也与整合素相互作用,表明c端区域对整合素识别也很重要。Rho与整合素αvβ6的对接表明,Rho的c端H68残基与β6的D129相互作用。相反,Ech与整合素α5β1的对接表明,Ech的c端H44残基与β1的Q191相互作用。其抑制HUVEC增殖和A375黑色素瘤细胞迁移的活性分别是Rho的78.5倍和10.9倍。这些发现表明,崩解素的二硫键模式、RGD环和c端区域可能导致它们的功能差异。Rho和Ech之间的功能和结构差异支持它们作为针对各自整合素设计药物的支架的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Structural and Functional Differences of Rhodostomin and Echistatin in Integrin Recognition and Biological Implications.

Rhodostomin (Rho) and Echistatin (Ech) are RGD-containing disintegrins with different sizes, disulfide bond patterns, and amino acid sequences in their RGD loops and C-termini. Cell adhesion analyzes showed that Rho exhibited a 5.2-, 18.9-, 2.2-, and 1.7-fold lower inhibitory activity against integrins αvβ3, α5β1, αIIbβ3, and αvβ5 in comparison with those of Ech. In contrast, Rho exhibited an 8.8-fold higher activity than Ech in inhibiting integrin αvβ6. The swapping of Ech's RGD loop and C-terminal sequences into those of Rho cannot increase its integrins' inhibitory activities. Interestingly, the mutation of Ech into Rho's RGD loop PRGDMP sequence and C-terminal YH sequence caused an 8.2-fold higher activity in inhibiting integrin αvβ6. Structural analyzes of Rho and Ech showed that they have similar conformations in their RGD loop and different conformations in their C-terminal regions. Molecular docking found that not only the RGD loop but also the C-terminal region of Rho and Ech interacted with integrins, showing that the C-terminal region is also important for integrin recognition. The docking of Rho into integrin αvβ6 showed that the C-terminal H68 residue of Rho interacted with D129 of β6. In contrast, the docking of Ech into integrin α5β1 showed that the C-terminal H44 residue of Ech interacted with Q191 of β1. Ech exhibited 78.5- and 10.9-fold higher activities in inhibiting HUVEC proliferation and A375 melanoma cell migration than those of Rho. These findings demonstrate that the disulfide bond pattern, RGD loop, and C-terminal region of disintegrins may cause their functional differences. The functional and structural differences between Rho and Ech support their potential as scaffolds to design drugs targeting their respective integrins.

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来源期刊
Proteins-Structure Function and Bioinformatics
Proteins-Structure Function and Bioinformatics 生物-生化与分子生物学
CiteScore
5.90
自引率
3.40%
发文量
172
审稿时长
3 months
期刊介绍: PROTEINS : Structure, Function, and Bioinformatics publishes original reports of significant experimental and analytic research in all areas of protein research: structure, function, computation, genetics, and design. The journal encourages reports that present new experimental or computational approaches for interpreting and understanding data from biophysical chemistry, structural studies of proteins and macromolecular assemblies, alterations of protein structure and function engineered through techniques of molecular biology and genetics, functional analyses under physiologic conditions, as well as the interactions of proteins with receptors, nucleic acids, or other specific ligands or substrates. Research in protein and peptide biochemistry directed toward synthesizing or characterizing molecules that simulate aspects of the activity of proteins, or that act as inhibitors of protein function, is also within the scope of PROTEINS. In addition to full-length reports, short communications (usually not more than 4 printed pages) and prediction reports are welcome. Reviews are typically by invitation; authors are encouraged to submit proposed topics for consideration.
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