KNUTS-DB -一个数据驱动的NUTS知识数据库。

IF 3.2 4区 医学 Q1 Pharmacology, Toxicology and Pharmaceutics
Emanuel Kemmler, Margitta Worm, Robert Preissner, Priyanka Banerjee
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引用次数: 0

摘要

目的:为了准确地探索食物消费对健康结果的影响,需要对多成分食品中存在的营养素和过敏原进行数据库指定。在树坚果中发现的植物化学物质与抗氧化、抗炎、抗增殖、抗病毒、化学预防和高胆固醇作用有关,所有这些作用都已知会影响几种致病过程的开始和进展。我们已经开发了KNUTS-DB -一个数据驱动的坚果知识数据库-包含花生和树坚果的化学营养素、分子靶点、途径、疾病关联和临床定义的食物过敏原特性的信息。方法:该数据库包括与杏仁、腰果、山核桃、核桃、开心果、花生和核桃等极其丰富多样的元数据相关的数据集。此外,该数据库还允许用户对用户定义的化学营养素进行pathway和GO-Term富集分析。分析结果用热图和网络图表示。结果:数据库可以使用诸如相似性搜索、相互作用值、过敏原类型和特定坚果类型等选项进行搜索。KNUTS-DB为研究人员提供了一个独特的平台来探索坚果的化学成分,并研究坚果成分与健康结果之间的关系,为分子机制提供了更深入的见解。结论:KNUTS-DB是第一个通过https://allergypred.charite.de/KNutsDB/向所有用户免费提供的,无需登录或注册。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
KNUTS-DB - a data-driven knowledge database for NUTS.

Objectives: Databases specifying the nutrients and allergens present in multi-ingredient foods are required to explore the effect of food consumption on health outcomes accurately. The phytochemicals found in tree nuts have been associated with antioxidant, anti-inflammatory, antiproliferative, antiviral, chemo preventive and hypercholesterolaemic actions, all of which are known to affect the initiation and progression of several pathogenic processes. We have developed KNUTS-DB - a data-driven knowledge database for nuts - containing information on the chemical nutrients, molecular targets, pathways, disease associations, and clinically defined food allergen properties of peanuts and tree nuts.

Methods: The database includes data sets associated with extremely rich and diverse metadata on almonds, cashew, pecan, walnut, pistachio, peanut and walnut. Additionally, the database allows users to perform pathway and GO-Term enrichment analysis for user-defined chemical nutrients. The results of the analysis are presented using heatmaps and network plots.

Results: The database can be searched using options such as similarity search, interaction values, type of allergens, and specific nut types. KNUTS-DB offers researchers a unique platform to explore nuts' chemical composition and to investigate associations between nut composition and health outcomes - providing deeper insights into the molecular mechanisms.

Conclusions: KNUTS-DB, the first of its kind, is freely available to all users via https://allergypred.charite.de/KNutsDB/ without any login or registration.

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来源期刊
CiteScore
6.60
自引率
3.10%
发文量
66
审稿时长
6-12 weeks
期刊介绍: Toxicology Mechanisms and Methods is a peer-reviewed journal whose aim is twofold. Firstly, the journal contains original research on subjects dealing with the mechanisms by which foreign chemicals cause toxic tissue injury. Chemical substances of interest include industrial compounds, environmental pollutants, hazardous wastes, drugs, pesticides, and chemical warfare agents. The scope of the journal spans from molecular and cellular mechanisms of action to the consideration of mechanistic evidence in establishing regulatory policy. Secondly, the journal addresses aspects of the development, validation, and application of new and existing laboratory methods, techniques, and equipment.
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