{"title":"白藜芦醇与caspase 9相互作用的计算机分析:揭示其作为抗nsclc药物的潜力。","authors":"Mohd Saeed, Samra Siddiqui, Munazzah Tasleem, Md Jahoor Alam, Saad Saeed Alqathani, Fevzi Bardakci, Nujud Almuzaini, Tarun Kumar Upadhyay, Rania Abdeen Hussain Abdalla, Farrukh Aqil","doi":"10.1080/07391102.2025.2487190","DOIUrl":null,"url":null,"abstract":"<p><p>Lung cancer is one of the leading causes of cancer-related deaths worldwide. Non-Small Cell Lung Cancer (NSCLC) represents a predominant subset of lung cancer cases with a pressing need for innovative therapeutic strategies. Plumbagin, a naturally occurring naphthoquinone, has been investigated for its pharmacokinetic properties and potential anti-cancer effects, particularly against NSCLC. This study encompasses <i>in-silico</i> analysis of plumbagin's pharmacokinetic profile, its molecular interaction with the caspase-9 protein, and a subsequent molecular dynamic simulation to assess the stability of this interaction. Our findings demonstrate that plumbagin exhibits commendable drug-likeness properties in line with Lipinski's rule of five, Veber's criteria, and Ghose's criteria. Molecular docking results highlight its promising binding affinity to caspase-9 with a docking score of -5.3 kcal/mol. Molecular dynamic simulations further substantiate the stability of this protein-ligand complex. Collectively, these results emphasize plumbagin's potential as a caspase activator against NSCLC, emphasizing the need for in-depth biological studies to further validate these findings.</p>","PeriodicalId":15272,"journal":{"name":"Journal of Biomolecular Structure & Dynamics","volume":" ","pages":"1-11"},"PeriodicalIF":2.7000,"publicationDate":"2025-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>In silico</i> analysis of plumbagin's interaction with caspase 9: unveiling its potential as an anti-NSCLS agent.\",\"authors\":\"Mohd Saeed, Samra Siddiqui, Munazzah Tasleem, Md Jahoor Alam, Saad Saeed Alqathani, Fevzi Bardakci, Nujud Almuzaini, Tarun Kumar Upadhyay, Rania Abdeen Hussain Abdalla, Farrukh Aqil\",\"doi\":\"10.1080/07391102.2025.2487190\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Lung cancer is one of the leading causes of cancer-related deaths worldwide. Non-Small Cell Lung Cancer (NSCLC) represents a predominant subset of lung cancer cases with a pressing need for innovative therapeutic strategies. Plumbagin, a naturally occurring naphthoquinone, has been investigated for its pharmacokinetic properties and potential anti-cancer effects, particularly against NSCLC. This study encompasses <i>in-silico</i> analysis of plumbagin's pharmacokinetic profile, its molecular interaction with the caspase-9 protein, and a subsequent molecular dynamic simulation to assess the stability of this interaction. Our findings demonstrate that plumbagin exhibits commendable drug-likeness properties in line with Lipinski's rule of five, Veber's criteria, and Ghose's criteria. Molecular docking results highlight its promising binding affinity to caspase-9 with a docking score of -5.3 kcal/mol. Molecular dynamic simulations further substantiate the stability of this protein-ligand complex. Collectively, these results emphasize plumbagin's potential as a caspase activator against NSCLC, emphasizing the need for in-depth biological studies to further validate these findings.</p>\",\"PeriodicalId\":15272,\"journal\":{\"name\":\"Journal of Biomolecular Structure & Dynamics\",\"volume\":\" \",\"pages\":\"1-11\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-04-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomolecular Structure & Dynamics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/07391102.2025.2487190\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomolecular Structure & Dynamics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/07391102.2025.2487190","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
In silico analysis of plumbagin's interaction with caspase 9: unveiling its potential as an anti-NSCLS agent.
Lung cancer is one of the leading causes of cancer-related deaths worldwide. Non-Small Cell Lung Cancer (NSCLC) represents a predominant subset of lung cancer cases with a pressing need for innovative therapeutic strategies. Plumbagin, a naturally occurring naphthoquinone, has been investigated for its pharmacokinetic properties and potential anti-cancer effects, particularly against NSCLC. This study encompasses in-silico analysis of plumbagin's pharmacokinetic profile, its molecular interaction with the caspase-9 protein, and a subsequent molecular dynamic simulation to assess the stability of this interaction. Our findings demonstrate that plumbagin exhibits commendable drug-likeness properties in line with Lipinski's rule of five, Veber's criteria, and Ghose's criteria. Molecular docking results highlight its promising binding affinity to caspase-9 with a docking score of -5.3 kcal/mol. Molecular dynamic simulations further substantiate the stability of this protein-ligand complex. Collectively, these results emphasize plumbagin's potential as a caspase activator against NSCLC, emphasizing the need for in-depth biological studies to further validate these findings.
期刊介绍:
The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.