生物制剂可发展性数据分析使用分层聚类加速候选先导选择,优化和预配方筛选。

IF 7.3 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL
mAbs Pub Date : 2025-12-01 Epub Date: 2025-05-10 DOI:10.1080/19420862.2025.2502127
Kevin James Metcalf, Galen Wo, Jan Paulo Zaragoza, Fahimeh Raoufi, Jeanne Baker, Daoyang Chen, Mehabaw Derebe, Jason Hogan, Amy Hsu, Esther Kofman, David Leigh, Mandy Li, Dan Malashock, Cate Mann, Soha Motlagh, Jihea Park, Karthik Sathiyamoorthy, Madhura Shidhore, Yinyan Tang, Kevin Teng, Katharine Williams, Andrew Waight, Sultan Yilmaz, Fan Zhang, Huimin Zhong, Laurence Fayadat-Dilman, Marc Bailly
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引用次数: 0

摘要

在临床前和临床开发阶段确定最佳的单蛋白序列对生物药物的快速开发和整体成功至关重要。发现阶段的高通量可开发性评估用于根据生物物理性质对有效分子进行排序,降低次优分子的优先级,或触发额外的蛋白质工程。由于获取这些分子的数据量,手工分析方法对分子进行排序容易出错且耗时。在这里,我们介绍了分层聚类分析在数据驱动的生物制剂先导选择和使用高通量可发展性数据的预配方筛选中的应用。本文应用分层聚类分析对三种不同的抗体模式进行优先排序,包括双特异性抗体的格式和链配对,亲和成熟过程中序列优化的单克隆抗体,双特异性scFv-Fab融合分子的配方前筛选,以及免疫活动中的单克隆抗体。这种高通量的方法根据分子的可显影性和预制剂性质对分子进行排序,可以大大简化、简化和加速生物制剂的发现和早期开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Biologics developability data analysis using hierarchical clustering accelerates candidate lead selection, optimization, and preformulation screening.

Identification of an optimal single protein sequence at the discovery stage for preclinical and clinical development is critical to the rapid development and overall success of a biologic drug. High throughput developability assessments at the discovery stage are used to rank potent molecules by their biophysical properties, deprioritize suboptimal molecules, or trigger additional rounds of protein engineering. Due to the amount of data acquired for these molecules, manual analysis methods to rank molecules are error prone and time-consuming. Here, we present applications of hierarchical clustering analysis for data-driven lead selection of biologics and preformulation screening using high throughput developability data. Hierarchical clustering analysis was applied here for prioritization of three different antibody modalities, including format and chain pairing of bispecific antibodies, sequence-optimized monoclonal antibodies from affinity maturation, preformulation screening of bispecific scFv-Fab fusion molecules, and monoclonal antibodies from an immunization campaign. This high-throughput method for ranking molecules by their developability characteristics and preformulation properties can substantially simplify, streamline, and accelerate biologics discovery and early development.

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来源期刊
mAbs
mAbs 工程技术-仪器仪表
CiteScore
10.70
自引率
11.30%
发文量
77
审稿时长
6-12 weeks
期刊介绍: mAbs is a multi-disciplinary journal dedicated to the art and science of antibody research and development. The journal has a strong scientific and medical focus, but also strives to serve a broader readership. The articles are thus of interest to scientists, clinical researchers, and physicians, as well as the wider mAb community, including our readers involved in technology transfer, legal issues, investment, strategic planning and the regulation of therapeutics.
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