利用奥兰氏沙门氏菌饥饿应激反应蛋白设计非伤寒沙门氏菌多表位疫苗的免疫信息学方法

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Lennin Isaac Garrido-Palazuelos, Mamuna Mukhtar, Salman Ali Khan, José Andrés Medrano-Félix, Haris Ahmed-Khan, Fahad M Alshabrmi, Osvaldo López-Cuevas, Berenice González-Torres, Nohelia Castro-Del Campo, Cristóbal Chaidez, José Roberto Aguirre-Sánchez, Hailah M Almohaimeed
{"title":"利用奥兰氏沙门氏菌饥饿应激反应蛋白设计非伤寒沙门氏菌多表位疫苗的免疫信息学方法","authors":"Lennin Isaac Garrido-Palazuelos, Mamuna Mukhtar, Salman Ali Khan, José Andrés Medrano-Félix, Haris Ahmed-Khan, Fahad M Alshabrmi, Osvaldo López-Cuevas, Berenice González-Torres, Nohelia Castro-Del Campo, Cristóbal Chaidez, José Roberto Aguirre-Sánchez, Hailah M Almohaimeed","doi":"10.1080/07391102.2025.2500685","DOIUrl":null,"url":null,"abstract":"<p><p>Non-typhoidal <i>Salmonella</i> is responsible for gastrointestinal illnesses worldwide. Therefore, it is important to implement effective therapeutic interventions for preventing these diseases. Vaccines have proven highly efficacious in the treatment and prevention of several illnesses. Nevertheless, there is currently no authorized vaccine available for non-typhoidal salmonellosis. This study aimed to employ in silico techniques to develop a multi-epitope vaccine targeting non-typhoidal salmonellosis. Specifically, we focused on proteins associated with the starvation stress response (SSR) in <i>Salmonella</i> Oranienburg. The presence of these proteins is essential for the survival and disease of the host organism. The vaccine sequence was constructed utilizing B-cell and T-cell epitopes. Linkers, adjuvants and PADRE sequences were used to establish connections between epitopes. The vaccine exhibited no allergenicity, toxigenicity and a significantly high antigenicity score. Docking analysis conducted between the designed vaccine and the TLR-1, TLR-2 and TLR-4 receptors demonstrated favorable interactions and the potential to activate these receptors. In addition, it was found through immunological simulation testing that the vaccine elicits a robust immune response. The use of these proteins in the construction of a multi-epitope vaccine shows potential in terms of both safety and immunogenicity.</p>","PeriodicalId":15272,"journal":{"name":"Journal of Biomolecular Structure & Dynamics","volume":" ","pages":"1-19"},"PeriodicalIF":2.7000,"publicationDate":"2025-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Immunoinformatic approach for designing a multi-epitope vaccine against non-typhoidal salmonellosis using starvation-stress response proteins from <i>Salmonella</i> Oranienburg.\",\"authors\":\"Lennin Isaac Garrido-Palazuelos, Mamuna Mukhtar, Salman Ali Khan, José Andrés Medrano-Félix, Haris Ahmed-Khan, Fahad M Alshabrmi, Osvaldo López-Cuevas, Berenice González-Torres, Nohelia Castro-Del Campo, Cristóbal Chaidez, José Roberto Aguirre-Sánchez, Hailah M Almohaimeed\",\"doi\":\"10.1080/07391102.2025.2500685\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Non-typhoidal <i>Salmonella</i> is responsible for gastrointestinal illnesses worldwide. Therefore, it is important to implement effective therapeutic interventions for preventing these diseases. Vaccines have proven highly efficacious in the treatment and prevention of several illnesses. Nevertheless, there is currently no authorized vaccine available for non-typhoidal salmonellosis. This study aimed to employ in silico techniques to develop a multi-epitope vaccine targeting non-typhoidal salmonellosis. Specifically, we focused on proteins associated with the starvation stress response (SSR) in <i>Salmonella</i> Oranienburg. The presence of these proteins is essential for the survival and disease of the host organism. The vaccine sequence was constructed utilizing B-cell and T-cell epitopes. Linkers, adjuvants and PADRE sequences were used to establish connections between epitopes. The vaccine exhibited no allergenicity, toxigenicity and a significantly high antigenicity score. Docking analysis conducted between the designed vaccine and the TLR-1, TLR-2 and TLR-4 receptors demonstrated favorable interactions and the potential to activate these receptors. In addition, it was found through immunological simulation testing that the vaccine elicits a robust immune response. The use of these proteins in the construction of a multi-epitope vaccine shows potential in terms of both safety and immunogenicity.</p>\",\"PeriodicalId\":15272,\"journal\":{\"name\":\"Journal of Biomolecular Structure & Dynamics\",\"volume\":\" \",\"pages\":\"1-19\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-05-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomolecular Structure & Dynamics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/07391102.2025.2500685\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomolecular Structure & Dynamics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/07391102.2025.2500685","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

非伤寒沙门氏菌是全球胃肠道疾病的罪魁祸首。因此,实施有效的治疗干预措施对预防这些疾病至关重要。疫苗已被证明在治疗和预防几种疾病方面非常有效。然而,目前尚无针对非伤寒沙门氏菌病的授权疫苗。本研究旨在利用计算机技术开发针对非伤寒沙门氏菌病的多表位疫苗。具体来说,我们关注的是与奥兰氏沙门氏菌饥饿应激反应(SSR)相关的蛋白质。这些蛋白质的存在对宿主生物的生存和疾病是必不可少的。利用b细胞和t细胞表位构建疫苗序列。使用连接子、佐剂和PADRE序列建立表位之间的连接。该疫苗无致敏性、毒性和显著的高抗原性评分。设计的疫苗与TLR-1、TLR-2和TLR-4受体对接分析表明,疫苗与TLR-1、TLR-2和TLR-4受体相互作用良好,具有激活这些受体的潜力。此外,通过免疫学模拟试验发现,该疫苗引起了强大的免疫反应。在构建多表位疫苗中使用这些蛋白质在安全性和免疫原性方面显示出潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Immunoinformatic approach for designing a multi-epitope vaccine against non-typhoidal salmonellosis using starvation-stress response proteins from Salmonella Oranienburg.

Non-typhoidal Salmonella is responsible for gastrointestinal illnesses worldwide. Therefore, it is important to implement effective therapeutic interventions for preventing these diseases. Vaccines have proven highly efficacious in the treatment and prevention of several illnesses. Nevertheless, there is currently no authorized vaccine available for non-typhoidal salmonellosis. This study aimed to employ in silico techniques to develop a multi-epitope vaccine targeting non-typhoidal salmonellosis. Specifically, we focused on proteins associated with the starvation stress response (SSR) in Salmonella Oranienburg. The presence of these proteins is essential for the survival and disease of the host organism. The vaccine sequence was constructed utilizing B-cell and T-cell epitopes. Linkers, adjuvants and PADRE sequences were used to establish connections between epitopes. The vaccine exhibited no allergenicity, toxigenicity and a significantly high antigenicity score. Docking analysis conducted between the designed vaccine and the TLR-1, TLR-2 and TLR-4 receptors demonstrated favorable interactions and the potential to activate these receptors. In addition, it was found through immunological simulation testing that the vaccine elicits a robust immune response. The use of these proteins in the construction of a multi-epitope vaccine shows potential in terms of both safety and immunogenicity.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信