人血红蛋白与2,4-二氯苯氧乙酸相互作用的光谱、分子对接和分子动力学模拟研究。

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ruhul Quds, Md Amiruddin Hashmi, Monika Sharma, Riaz Mahmood
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引用次数: 0

摘要

2,4-二氯苯氧乙酸(2,4- d)是一种广泛用于防治双子叶杂草的系统除草剂。一般人群由于食用受污染的食物和水而经常接触到2,4- d。已知2,4- d会破坏人红细胞中的细胞成分。本研究详细研究了2,4- d与人血红蛋白(Hb)的相互作用,血红蛋白是红细胞中的主要蛋白(血红蛋白占95%),并利用多光谱和硅技术表征了其结合特性。紫外可见光谱表明2,4- d与Hb相互作用。在三种不同温度下的荧光猝灭研究进一步表明2,4- d与Hb结合并形成基态配合物。结果表明2,4- d可以自发结合到Hb上的一个中等亲和力的结合位点上。此外,结合过程涉及到范德华力和氢键。圆二色性和同步荧光光谱显示,2,4- d的结合改变了Hb的构象,降低了其色氨酸残基周围的极性。2,4- d结合抑制Hb固有酯酶活性。计算分析表明,hb -2,4- d配合物是稳定的,并确定了结合位点的氨基酸残基。因此,2,4- d与Hb相互作用,改变蛋白质的构象,从而损害其功能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A spectroscopic, molecular docking and molecular dynamic simulation study on the interaction of human hemoglobin with 2,4-dichlorophenoxyacetic acid.

2,4-Dichlorophenoxyacetic acid (2,4-D) is a systemic herbicide widely used to control dicotyledonous weeds. The general population is routinely exposed to 2,4-D due to consumption of contaminated food and water. 2,4-D is known to damage cellular components in human erythrocytes. This study investigated in detail the interaction of 2,4-D with human hemoglobin (Hb), the major protein in erythrocytes (>95%), and characterized the binding properties utilizing multi-spectrometric and in silico techniques. The UV-visible spectra suggested that 2,4-D interacts with Hb. The fluorescence quenching studies at three different temperatures further showed the binding of 2,4-D to Hb and the formation of a ground-state complex. The results indicated that 2,4-D binds spontaneously to a single moderate-affinity binding site on Hb. Furthermore, the binding process involved van der Waals forces and hydrogen bonding. Circular dichroism and synchronous fluorescence spectra showed that the binding of 2,4-D altered the conformation of Hb and decreased the polarity around its tryptophan residues. 2,4-D binding inhibited the inherent esterase activity of Hb. Computational analysis demonstrated that the Hb-2,4-D complex was stable and identified the amino acid residues at the binding site. Thus, 2,4-D interacts with Hb, modifies the protein conformation and consequently impairs its functions.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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