{"title":"糖蛋白组学及其在理解细菌o -链糖基化中的作用。","authors":"Kristian I Karlic, Hamza Tahir, Nichollas E Scott","doi":"10.1002/pmic.202400256","DOIUrl":null,"url":null,"abstract":"<p><p>Protein glycosylation is now recognized as a ubiquitous process observed in all domains of life. Within bacterial species, carbohydrates can be attached to multiple residues with glycosylation of serine, threonine, or tyrosine residues via their hydroxyl side chains referred to as O-linked glycosylation. To date, multiple bacterial enzymes have been identified that mediate O-linked glycosylation targeting either surface or periplasmic bacterial proteins, and in the case of toxin/effectors, host proteins. Within this review, we discuss the current understanding of common bacterial O-linked glycosylation systems and the glycoproteomic approaches which have been used to characterize these events. Focusing on O-oligosaccharyltransferases (O-OTases), flagellin-specific glycosylation systems, and glycosyltransferase toxin/effectors, we discuss the characteristics of known glycosylation systems. For the general O-linked systems mediated by the PglL oligosaccharyltransferases, we outline the key considerations when assessing glycosylation events across the Burkholderia, Neisseria, and Acinetobacter genera. In addition, we highlight the technologies and advancements in glycoproteomic techniques, as well as the bioinformatic tools that now facilitate high throughput studies of O-linked glycosylation within bacterial species. Combined, this review outlines our current understanding of O-linked glycosylation within well characterized Gram-negative genera and the current technologies available for exploring bacterial O-glycoproteomes.</p>","PeriodicalId":224,"journal":{"name":"Proteomics","volume":" ","pages":"e202400256"},"PeriodicalIF":3.4000,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Glycoproteomics and Its Role in Understanding Bacterial O-Linked Glycosylation.\",\"authors\":\"Kristian I Karlic, Hamza Tahir, Nichollas E Scott\",\"doi\":\"10.1002/pmic.202400256\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Protein glycosylation is now recognized as a ubiquitous process observed in all domains of life. Within bacterial species, carbohydrates can be attached to multiple residues with glycosylation of serine, threonine, or tyrosine residues via their hydroxyl side chains referred to as O-linked glycosylation. To date, multiple bacterial enzymes have been identified that mediate O-linked glycosylation targeting either surface or periplasmic bacterial proteins, and in the case of toxin/effectors, host proteins. Within this review, we discuss the current understanding of common bacterial O-linked glycosylation systems and the glycoproteomic approaches which have been used to characterize these events. Focusing on O-oligosaccharyltransferases (O-OTases), flagellin-specific glycosylation systems, and glycosyltransferase toxin/effectors, we discuss the characteristics of known glycosylation systems. For the general O-linked systems mediated by the PglL oligosaccharyltransferases, we outline the key considerations when assessing glycosylation events across the Burkholderia, Neisseria, and Acinetobacter genera. In addition, we highlight the technologies and advancements in glycoproteomic techniques, as well as the bioinformatic tools that now facilitate high throughput studies of O-linked glycosylation within bacterial species. Combined, this review outlines our current understanding of O-linked glycosylation within well characterized Gram-negative genera and the current technologies available for exploring bacterial O-glycoproteomes.</p>\",\"PeriodicalId\":224,\"journal\":{\"name\":\"Proteomics\",\"volume\":\" \",\"pages\":\"e202400256\"},\"PeriodicalIF\":3.4000,\"publicationDate\":\"2025-04-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proteomics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1002/pmic.202400256\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proteomics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/pmic.202400256","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Glycoproteomics and Its Role in Understanding Bacterial O-Linked Glycosylation.
Protein glycosylation is now recognized as a ubiquitous process observed in all domains of life. Within bacterial species, carbohydrates can be attached to multiple residues with glycosylation of serine, threonine, or tyrosine residues via their hydroxyl side chains referred to as O-linked glycosylation. To date, multiple bacterial enzymes have been identified that mediate O-linked glycosylation targeting either surface or periplasmic bacterial proteins, and in the case of toxin/effectors, host proteins. Within this review, we discuss the current understanding of common bacterial O-linked glycosylation systems and the glycoproteomic approaches which have been used to characterize these events. Focusing on O-oligosaccharyltransferases (O-OTases), flagellin-specific glycosylation systems, and glycosyltransferase toxin/effectors, we discuss the characteristics of known glycosylation systems. For the general O-linked systems mediated by the PglL oligosaccharyltransferases, we outline the key considerations when assessing glycosylation events across the Burkholderia, Neisseria, and Acinetobacter genera. In addition, we highlight the technologies and advancements in glycoproteomic techniques, as well as the bioinformatic tools that now facilitate high throughput studies of O-linked glycosylation within bacterial species. Combined, this review outlines our current understanding of O-linked glycosylation within well characterized Gram-negative genera and the current technologies available for exploring bacterial O-glycoproteomes.
期刊介绍:
PROTEOMICS is the premier international source for information on all aspects of applications and technologies, including software, in proteomics and other "omics". The journal includes but is not limited to proteomics, genomics, transcriptomics, metabolomics and lipidomics, and systems biology approaches. Papers describing novel applications of proteomics and integration of multi-omics data and approaches are especially welcome.