糖蛋白组学及其在理解细菌o -链糖基化中的作用。

IF 3.4 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Proteomics Pub Date : 2025-04-21 DOI:10.1002/pmic.202400256
Kristian I Karlic, Hamza Tahir, Nichollas E Scott
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引用次数: 0

摘要

蛋白质糖基化现在被认为是一个普遍存在的过程,在生命的所有领域都可以观察到。在细菌物种中,碳水化合物可以通过其羟基侧链(o -键糖基化)与丝氨酸、苏氨酸或酪氨酸残基的糖基化结合到多个残基上。迄今为止,已经确定了多种细菌酶介导o -链糖基化,靶向表面或质周细菌蛋白,在毒素/效应器的情况下,宿主蛋白。在这篇综述中,我们讨论了目前对常见细菌o链糖基化系统的理解以及用于表征这些事件的糖蛋白组学方法。以o -寡糖转移酶(O-OTases)、鞭毛蛋白特异性糖基化系统和糖基转移酶毒素/效应器为重点,我们讨论了已知糖基化系统的特征。对于由pgl低聚糖转移酶介导的一般o -连锁系统,我们概述了评估伯克霍尔德氏菌、奈瑟氏菌和不动杆菌属糖基化事件时的关键考虑因素。此外,我们强调了糖蛋白组学技术的技术和进步,以及生物信息学工具,这些工具现在促进了细菌物种中o -链糖基化的高通量研究。综上所述,本文概述了我们目前对特征良好的革兰氏阴性属中o -链糖基化的理解以及目前用于探索细菌o -糖蛋白组的技术。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Glycoproteomics and Its Role in Understanding Bacterial O-Linked Glycosylation.

Protein glycosylation is now recognized as a ubiquitous process observed in all domains of life. Within bacterial species, carbohydrates can be attached to multiple residues with glycosylation of serine, threonine, or tyrosine residues via their hydroxyl side chains referred to as O-linked glycosylation. To date, multiple bacterial enzymes have been identified that mediate O-linked glycosylation targeting either surface or periplasmic bacterial proteins, and in the case of toxin/effectors, host proteins. Within this review, we discuss the current understanding of common bacterial O-linked glycosylation systems and the glycoproteomic approaches which have been used to characterize these events. Focusing on O-oligosaccharyltransferases (O-OTases), flagellin-specific glycosylation systems, and glycosyltransferase toxin/effectors, we discuss the characteristics of known glycosylation systems. For the general O-linked systems mediated by the PglL oligosaccharyltransferases, we outline the key considerations when assessing glycosylation events across the Burkholderia, Neisseria, and Acinetobacter genera. In addition, we highlight the technologies and advancements in glycoproteomic techniques, as well as the bioinformatic tools that now facilitate high throughput studies of O-linked glycosylation within bacterial species. Combined, this review outlines our current understanding of O-linked glycosylation within well characterized Gram-negative genera and the current technologies available for exploring bacterial O-glycoproteomes.

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来源期刊
Proteomics
Proteomics 生物-生化研究方法
CiteScore
6.30
自引率
5.90%
发文量
193
审稿时长
3 months
期刊介绍: PROTEOMICS is the premier international source for information on all aspects of applications and technologies, including software, in proteomics and other "omics". The journal includes but is not limited to proteomics, genomics, transcriptomics, metabolomics and lipidomics, and systems biology approaches. Papers describing novel applications of proteomics and integration of multi-omics data and approaches are especially welcome.
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