通过直接推导非对称膜的能量学来阐明其力学性质。

IF 3.1 3区 化学 Q2 Chemistry
Giacomo Fiorin and Lucy R. Forrest
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引用次数: 0

摘要

质膜(PM)两个小叶之间的不对称性被广泛认为是大多数与PM相关的生化过程的必要条件。然而,最近的研究也表明,不对称的双层结构在弯曲时比对称的双层结构明显更硬,这表明同样的不对称可能会阻碍PM重塑自身的能力。在这里,我们通过结合全原子分子动力学(MD)模拟和增强的采样方案来解决这个问题,该方案明确诱导膜变形以量化其自由能成本。研究小的不对称POPC/DOPC双分子层,我们发现,与最小不平衡的双分子层或相同两种脂质的对称双分子层相比,小叶之间的小密度不平衡增加了它们的弯曲刚度。这一结果与最近提出的理论模型是一致的,该模型认为不对称膜中差异应力是硬化的主要来源。本研究中使用的第一性原理方法广泛适用于其他类型的膜,可以进一步探索不对称和曲率之间的相互作用,或模拟PM的特定生物条件。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Elucidating the mechanical properties of asymmetric membranes by direct derivation of their energetics†

Elucidating the mechanical properties of asymmetric membranes by direct derivation of their energetics†

The asymmetry between the two leaflets of a plasma membrane (PM) is widely accepted as an essential condition for most PM-associated biochemical processes. However, recent work has also shown that asymmetric bilayers can be significantly stiffer upon bending than symmetric ones, suggesting that the same asymmetry may hinder the ability of the PM to remodel itself. Here, we address this issue by combining all-atom molecular dynamics (MD) simulations with an enhanced sampling scheme that explicitly induces membrane deformations to quantify their free-energy cost. Examining small asymmetric POPC/DOPC bilayers, we find that a small density imbalance between the leaflets increases their bending rigidity compared to bilayers with minimal imbalance, or to symmetric bilayers of the same two lipids. This result is consistent with recently proposed theoretical models that identify differential stress as the main source of stiffening in asymmetric membranes. The first-principles approach used in this study is broadly applicable to other types of membrane, enabling further exploration of the interplay between asymmetry and curvature, or the simulation of specific biological conditions of the PM.

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来源期刊
Faraday Discussions
Faraday Discussions CHEMISTRY, PHYSICAL-
CiteScore
4.90
自引率
0.00%
发文量
259
审稿时长
2.8 months
期刊介绍: Discussion summary and research papers from discussion meetings that focus on rapidly developing areas of physical chemistry and its interfaces
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