Marni E. Cueno , Noa Shintaku , Noe Hayasaki , Yuna Migita , Kenichi Imai
{"title":"人造血网络中不同SARS-CoV-2刺突蛋白感染点的网络建模","authors":"Marni E. Cueno , Noa Shintaku , Noe Hayasaki , Yuna Migita , Kenichi Imai","doi":"10.1016/j.jtbi.2025.112139","DOIUrl":null,"url":null,"abstract":"<div><div>Hematopoiesis is a physiological process that mainly functions in both the formation and replenishment of varying types of blood cells. SARS-CoV-2 has been reported to affect the human hematopoietic system at multiple infection points leading to multiple types of blood disorders. However, the possible effects of the different SARS-CoV-2 infection points within the hematopoietic system were never fully understood. In this study, we designed and generated multiple human hematopoietic network models representing the varying known SARS-CoV-2 infection points within the human hematopoietic system. Subsequently, centrality measurement analyses were performed to identify significant nodes and edges within the models. We putatively generated human hematopoietic network models to represent the distinct, synergistic, and integrated SARS-CoV-2 spike protein infection points within the human hematopoietic system. Additionally, we potentially established that neither the discrete nor the synergistic network models showed any changes in the human hematopoietic network, which we attributed to the conserved nature of the hematopoietic system. Furthermore, we presumably demonstrated that the integrated network model indicated that erythropoiesis and thrombopoiesis were primarily affected. Overall, we propose that an integrated network model is putatively the more accurate representation of the human hematopoietic system in the presence of SARS-CoV-2 infection involving the spike protein.</div></div>","PeriodicalId":54763,"journal":{"name":"Journal of Theoretical Biology","volume":"609 ","pages":"Article 112139"},"PeriodicalIF":2.0000,"publicationDate":"2025-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Network modeling of the different SARS-CoV-2 spike protein infection points within the human hematopoietic network\",\"authors\":\"Marni E. Cueno , Noa Shintaku , Noe Hayasaki , Yuna Migita , Kenichi Imai\",\"doi\":\"10.1016/j.jtbi.2025.112139\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Hematopoiesis is a physiological process that mainly functions in both the formation and replenishment of varying types of blood cells. SARS-CoV-2 has been reported to affect the human hematopoietic system at multiple infection points leading to multiple types of blood disorders. However, the possible effects of the different SARS-CoV-2 infection points within the hematopoietic system were never fully understood. In this study, we designed and generated multiple human hematopoietic network models representing the varying known SARS-CoV-2 infection points within the human hematopoietic system. Subsequently, centrality measurement analyses were performed to identify significant nodes and edges within the models. We putatively generated human hematopoietic network models to represent the distinct, synergistic, and integrated SARS-CoV-2 spike protein infection points within the human hematopoietic system. Additionally, we potentially established that neither the discrete nor the synergistic network models showed any changes in the human hematopoietic network, which we attributed to the conserved nature of the hematopoietic system. Furthermore, we presumably demonstrated that the integrated network model indicated that erythropoiesis and thrombopoiesis were primarily affected. Overall, we propose that an integrated network model is putatively the more accurate representation of the human hematopoietic system in the presence of SARS-CoV-2 infection involving the spike protein.</div></div>\",\"PeriodicalId\":54763,\"journal\":{\"name\":\"Journal of Theoretical Biology\",\"volume\":\"609 \",\"pages\":\"Article 112139\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2025-05-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Theoretical Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022519325001055\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Theoretical Biology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022519325001055","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
Network modeling of the different SARS-CoV-2 spike protein infection points within the human hematopoietic network
Hematopoiesis is a physiological process that mainly functions in both the formation and replenishment of varying types of blood cells. SARS-CoV-2 has been reported to affect the human hematopoietic system at multiple infection points leading to multiple types of blood disorders. However, the possible effects of the different SARS-CoV-2 infection points within the hematopoietic system were never fully understood. In this study, we designed and generated multiple human hematopoietic network models representing the varying known SARS-CoV-2 infection points within the human hematopoietic system. Subsequently, centrality measurement analyses were performed to identify significant nodes and edges within the models. We putatively generated human hematopoietic network models to represent the distinct, synergistic, and integrated SARS-CoV-2 spike protein infection points within the human hematopoietic system. Additionally, we potentially established that neither the discrete nor the synergistic network models showed any changes in the human hematopoietic network, which we attributed to the conserved nature of the hematopoietic system. Furthermore, we presumably demonstrated that the integrated network model indicated that erythropoiesis and thrombopoiesis were primarily affected. Overall, we propose that an integrated network model is putatively the more accurate representation of the human hematopoietic system in the presence of SARS-CoV-2 infection involving the spike protein.
期刊介绍:
The Journal of Theoretical Biology is the leading forum for theoretical perspectives that give insight into biological processes. It covers a very wide range of topics and is of interest to biologists in many areas of research, including:
• Brain and Neuroscience
• Cancer Growth and Treatment
• Cell Biology
• Developmental Biology
• Ecology
• Evolution
• Immunology,
• Infectious and non-infectious Diseases,
• Mathematical, Computational, Biophysical and Statistical Modeling
• Microbiology, Molecular Biology, and Biochemistry
• Networks and Complex Systems
• Physiology
• Pharmacodynamics
• Animal Behavior and Game Theory
Acceptable papers are those that bear significant importance on the biology per se being presented, and not on the mathematical analysis. Papers that include some data or experimental material bearing on theory will be considered, including those that contain comparative study, statistical data analysis, mathematical proof, computer simulations, experiments, field observations, or even philosophical arguments, which are all methods to support or reject theoretical ideas. However, there should be a concerted effort to make papers intelligible to biologists in the chosen field.