Ahmad Kassem El Zein , Alexandre de Fátima Cobre , Raul Edison Luna Lazo , Kevin Alves Antunes , Jane Manfron , Luana Mota Ferreira , Roberto Pontarolo
{"title":"化学计量学与机器学习相结合的傅里叶变换中红外光谱技术鉴定蒙太子","authors":"Ahmad Kassem El Zein , Alexandre de Fátima Cobre , Raul Edison Luna Lazo , Kevin Alves Antunes , Jane Manfron , Luana Mota Ferreira , Roberto Pontarolo","doi":"10.1016/j.chemolab.2025.105420","DOIUrl":null,"url":null,"abstract":"<div><div><em>Monteverdia ilicifolia</em> (Mart. Ex Reissek) Biral, a member of the Celastraceae botanical family, is widely recognized for its broad-spectrum therapeutic effects in South America, particularly in Brazil, where it is commonly referred as “espinheira-santa”. This study aimed to develop a chemometric and machine learning-based method for to accurately identify and differentiate <em>M. ilicifolia</em> from morphologically similar species used as adulterants. Fourier transform mid-infrared spectrometry (MIR-FTIR) was used to analyze leaves (n = 6 species, 3000 spectra), powders (n = 6 species, 3000 spectra) and extracts samples (n = 6 species, 600 spectra). The spectral datasets were predicted by Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA). The PLS-DA model was challenged with samples of other common plant species (n = 3) and commercial available <em>M. ilicifolia</em> (n = 10) to evaluate its predictive capability. PCA successfully distinguished between the plant species. PLS-DA achieved superior performance with extract samples, exhibiting sensitivity, specificity and accuracy of 94, 100 and 99 %, respectively. Machine learning algorithms were developed to better represent the leaves and powder samples through Random Forest and 10-fold validation methodology. The model yielded high accuracy in all sample types, with low false positive rate and excellent performance across the metrics of accuracy, recall, precision, F1 Score, Kappa index and Matthews Correlation Coefficient (MCC). PCA and PLS-DA models presented limitations over the complexity of leaves and powders samples. Machine learning algorithms showed robustness and flexibility, proving to be effective in the detection and discrimination of <em>M. ilicifolia</em>.</div></div>","PeriodicalId":9774,"journal":{"name":"Chemometrics and Intelligent Laboratory Systems","volume":"263 ","pages":"Article 105420"},"PeriodicalIF":3.7000,"publicationDate":"2025-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of Monteverdia ilicifolia by fourier-transform mid-infrared spectroscopy associated with chemometrics and machine learning\",\"authors\":\"Ahmad Kassem El Zein , Alexandre de Fátima Cobre , Raul Edison Luna Lazo , Kevin Alves Antunes , Jane Manfron , Luana Mota Ferreira , Roberto Pontarolo\",\"doi\":\"10.1016/j.chemolab.2025.105420\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div><em>Monteverdia ilicifolia</em> (Mart. Ex Reissek) Biral, a member of the Celastraceae botanical family, is widely recognized for its broad-spectrum therapeutic effects in South America, particularly in Brazil, where it is commonly referred as “espinheira-santa”. This study aimed to develop a chemometric and machine learning-based method for to accurately identify and differentiate <em>M. ilicifolia</em> from morphologically similar species used as adulterants. Fourier transform mid-infrared spectrometry (MIR-FTIR) was used to analyze leaves (n = 6 species, 3000 spectra), powders (n = 6 species, 3000 spectra) and extracts samples (n = 6 species, 600 spectra). The spectral datasets were predicted by Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA). The PLS-DA model was challenged with samples of other common plant species (n = 3) and commercial available <em>M. ilicifolia</em> (n = 10) to evaluate its predictive capability. PCA successfully distinguished between the plant species. PLS-DA achieved superior performance with extract samples, exhibiting sensitivity, specificity and accuracy of 94, 100 and 99 %, respectively. Machine learning algorithms were developed to better represent the leaves and powder samples through Random Forest and 10-fold validation methodology. The model yielded high accuracy in all sample types, with low false positive rate and excellent performance across the metrics of accuracy, recall, precision, F1 Score, Kappa index and Matthews Correlation Coefficient (MCC). PCA and PLS-DA models presented limitations over the complexity of leaves and powders samples. Machine learning algorithms showed robustness and flexibility, proving to be effective in the detection and discrimination of <em>M. ilicifolia</em>.</div></div>\",\"PeriodicalId\":9774,\"journal\":{\"name\":\"Chemometrics and Intelligent Laboratory Systems\",\"volume\":\"263 \",\"pages\":\"Article 105420\"},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2025-05-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Chemometrics and Intelligent Laboratory Systems\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169743925001054\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"AUTOMATION & CONTROL SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chemometrics and Intelligent Laboratory Systems","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169743925001054","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AUTOMATION & CONTROL SYSTEMS","Score":null,"Total":0}
Identification of Monteverdia ilicifolia by fourier-transform mid-infrared spectroscopy associated with chemometrics and machine learning
Monteverdia ilicifolia (Mart. Ex Reissek) Biral, a member of the Celastraceae botanical family, is widely recognized for its broad-spectrum therapeutic effects in South America, particularly in Brazil, where it is commonly referred as “espinheira-santa”. This study aimed to develop a chemometric and machine learning-based method for to accurately identify and differentiate M. ilicifolia from morphologically similar species used as adulterants. Fourier transform mid-infrared spectrometry (MIR-FTIR) was used to analyze leaves (n = 6 species, 3000 spectra), powders (n = 6 species, 3000 spectra) and extracts samples (n = 6 species, 600 spectra). The spectral datasets were predicted by Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA). The PLS-DA model was challenged with samples of other common plant species (n = 3) and commercial available M. ilicifolia (n = 10) to evaluate its predictive capability. PCA successfully distinguished between the plant species. PLS-DA achieved superior performance with extract samples, exhibiting sensitivity, specificity and accuracy of 94, 100 and 99 %, respectively. Machine learning algorithms were developed to better represent the leaves and powder samples through Random Forest and 10-fold validation methodology. The model yielded high accuracy in all sample types, with low false positive rate and excellent performance across the metrics of accuracy, recall, precision, F1 Score, Kappa index and Matthews Correlation Coefficient (MCC). PCA and PLS-DA models presented limitations over the complexity of leaves and powders samples. Machine learning algorithms showed robustness and flexibility, proving to be effective in the detection and discrimination of M. ilicifolia.
期刊介绍:
Chemometrics and Intelligent Laboratory Systems publishes original research papers, short communications, reviews, tutorials and Original Software Publications reporting on development of novel statistical, mathematical, or computer techniques in Chemistry and related disciplines.
Chemometrics is the chemical discipline that uses mathematical and statistical methods to design or select optimal procedures and experiments, and to provide maximum chemical information by analysing chemical data.
The journal deals with the following topics:
1) Development of new statistical, mathematical and chemometrical methods for Chemistry and related fields (Environmental Chemistry, Biochemistry, Toxicology, System Biology, -Omics, etc.)
2) Novel applications of chemometrics to all branches of Chemistry and related fields (typical domains of interest are: process data analysis, experimental design, data mining, signal processing, supervised modelling, decision making, robust statistics, mixture analysis, multivariate calibration etc.) Routine applications of established chemometrical techniques will not be considered.
3) Development of new software that provides novel tools or truly advances the use of chemometrical methods.
4) Well characterized data sets to test performance for the new methods and software.
The journal complies with International Committee of Medical Journal Editors'' Uniform requirements for manuscripts.