Scott Throner, Tianshu Feng, Jannik N. Andersen, Madhavi Bandi, Justin L. Engel, Shanzhong Gong, Deepali Gotur, Lina Gu, Alan Huang, Katherine Lazarides, John P. Maxwell, Patrick McCarren, Brian J. McMillan, Truc V. Pham, Antoine Simoneau, Alice Tsai, Douglas A. Whittington, Erik Wilker, Minjie Zhang, Wenhai Zhang
{"title":"发现TNG-6132,一种有效的,选择性的,口服生物可利用的USP1抑制剂","authors":"Scott Throner, Tianshu Feng, Jannik N. Andersen, Madhavi Bandi, Justin L. Engel, Shanzhong Gong, Deepali Gotur, Lina Gu, Alan Huang, Katherine Lazarides, John P. Maxwell, Patrick McCarren, Brian J. McMillan, Truc V. Pham, Antoine Simoneau, Alice Tsai, Douglas A. Whittington, Erik Wilker, Minjie Zhang, Wenhai Zhang","doi":"10.1016/j.bmcl.2025.130262","DOIUrl":null,"url":null,"abstract":"<div><div>USP1 (ubiquitin-specific peptidase 1) is a deubiquitinating enzyme that has been identified as essential in <em>BRCA1/2</em> mutant cells and implicated in the DNA damage response. Inhibition of USP1 by small molecule inhibitors disrupts DNA repair and replication and is being pursued as a potential anticancer therapeutic in <em>BRCA1/2</em> mutant cancers. We report the discovery of an <em>in vitro</em> and <em>in vivo</em> USP1 inhibitor tool compound TNG-6132 (<strong>18</strong>), a reversible, allosteric inhibitor of USP1, which strongly inhibits USP1 enzymatic activity. This inhibitory effect translates into <em>in vitro</em> cellular viability defects in a <em>BRCA1</em>-mutant breast cancer cell line, as well as an <em>in vivo</em> pharmacodynamic (PD) response and tumor growth suppression in a mouse xenograft efficacy model. Additionally, we report an X-ray co-crystal structure of TNG-6132 (<strong>18</strong>) bound in the USP1-UAF1 complex, a result that furthered our understanding of the role played by key elements of the pharmacophore of this chemotype as well as its mechanism of inhibition of USP1.</div></div>","PeriodicalId":256,"journal":{"name":"Bioorganic & Medicinal Chemistry Letters","volume":"124 ","pages":"Article 130262"},"PeriodicalIF":2.5000,"publicationDate":"2025-04-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Discovery of TNG-6132, a potent, selective, and orally bioavailable USP1 inhibitor\",\"authors\":\"Scott Throner, Tianshu Feng, Jannik N. Andersen, Madhavi Bandi, Justin L. Engel, Shanzhong Gong, Deepali Gotur, Lina Gu, Alan Huang, Katherine Lazarides, John P. Maxwell, Patrick McCarren, Brian J. McMillan, Truc V. Pham, Antoine Simoneau, Alice Tsai, Douglas A. Whittington, Erik Wilker, Minjie Zhang, Wenhai Zhang\",\"doi\":\"10.1016/j.bmcl.2025.130262\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>USP1 (ubiquitin-specific peptidase 1) is a deubiquitinating enzyme that has been identified as essential in <em>BRCA1/2</em> mutant cells and implicated in the DNA damage response. Inhibition of USP1 by small molecule inhibitors disrupts DNA repair and replication and is being pursued as a potential anticancer therapeutic in <em>BRCA1/2</em> mutant cancers. We report the discovery of an <em>in vitro</em> and <em>in vivo</em> USP1 inhibitor tool compound TNG-6132 (<strong>18</strong>), a reversible, allosteric inhibitor of USP1, which strongly inhibits USP1 enzymatic activity. This inhibitory effect translates into <em>in vitro</em> cellular viability defects in a <em>BRCA1</em>-mutant breast cancer cell line, as well as an <em>in vivo</em> pharmacodynamic (PD) response and tumor growth suppression in a mouse xenograft efficacy model. Additionally, we report an X-ray co-crystal structure of TNG-6132 (<strong>18</strong>) bound in the USP1-UAF1 complex, a result that furthered our understanding of the role played by key elements of the pharmacophore of this chemotype as well as its mechanism of inhibition of USP1.</div></div>\",\"PeriodicalId\":256,\"journal\":{\"name\":\"Bioorganic & Medicinal Chemistry Letters\",\"volume\":\"124 \",\"pages\":\"Article 130262\"},\"PeriodicalIF\":2.5000,\"publicationDate\":\"2025-04-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bioorganic & Medicinal Chemistry Letters\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0960894X25001714\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bioorganic & Medicinal Chemistry Letters","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0960894X25001714","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Discovery of TNG-6132, a potent, selective, and orally bioavailable USP1 inhibitor
USP1 (ubiquitin-specific peptidase 1) is a deubiquitinating enzyme that has been identified as essential in BRCA1/2 mutant cells and implicated in the DNA damage response. Inhibition of USP1 by small molecule inhibitors disrupts DNA repair and replication and is being pursued as a potential anticancer therapeutic in BRCA1/2 mutant cancers. We report the discovery of an in vitro and in vivo USP1 inhibitor tool compound TNG-6132 (18), a reversible, allosteric inhibitor of USP1, which strongly inhibits USP1 enzymatic activity. This inhibitory effect translates into in vitro cellular viability defects in a BRCA1-mutant breast cancer cell line, as well as an in vivo pharmacodynamic (PD) response and tumor growth suppression in a mouse xenograft efficacy model. Additionally, we report an X-ray co-crystal structure of TNG-6132 (18) bound in the USP1-UAF1 complex, a result that furthered our understanding of the role played by key elements of the pharmacophore of this chemotype as well as its mechanism of inhibition of USP1.
期刊介绍:
Bioorganic & Medicinal Chemistry Letters presents preliminary experimental or theoretical research results of outstanding significance and timeliness on all aspects of science at the interface of chemistry and biology and on major advances in drug design and development. The journal publishes articles in the form of communications reporting experimental or theoretical results of special interest, and strives to provide maximum dissemination to a large, international audience.