NuHTC:一个用于核实例分割和分类的混合任务级联

IF 10.7 1区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Bao Li , Zhenyu Liu , Song Zhang , Xiangyu Liu , Caixia Sun , Jiangang Liu , Bensheng Qiu , Jie Tian
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引用次数: 0

摘要

苏木精和伊红(H&;E)染色数字病理图像的细胞核实例分割和分类对于进一步下游的癌症诊断和预后任务至关重要。以往的工作主要集中在使用单层特征图的自底向上方法来分割核实例,而多层特征图似乎更适合于不同大小和类型的核实例。本文提出了一种基于混合任务级联(HTC)的自顶向下核实例分割与分类框架。NuHTC有两个新的组成部分:分水岭建议网络(WSPN)和混合特征提取器(HFE)。WSPN可以为区域建议网络提供额外的建议,从而使模型能够更精确地预测边界框。感兴趣区域对齐阶段的HFE可以更好地利用高级全局特征和低级语义特征。它可以指导NuHTC学习类内方差较小的核实例特征。我们在四个公开的多类核实例分割数据集上进行了广泛的实验。与其他先进的方法相比,NuHTC的定量结果证明了它在实例分割和分类方面的优势。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
NuHTC: A hybrid task cascade for nuclei instance segmentation and classification
Nuclei instance segmentation and classification of hematoxylin and eosin (H&E) stained digital pathology images are essential for further downstream cancer diagnosis and prognosis tasks. Previous works mainly focused on bottom-up methods using a single-level feature map for segmenting nuclei instances, while multilevel feature maps seemed to be more suitable for nuclei instances with various sizes and types. In this paper, we develop an effective top-down nuclei instance segmentation and classification framework (NuHTC) based on a hybrid task cascade (HTC). The NuHTC has two new components: a watershed proposal network (WSPN) and a hybrid feature extractor (HFE). The WSPN can provide additional proposals for the region proposal network which leads the model to predict bounding boxes more precisely. The HFE at the region of interest (RoI) alignment stage can better utilize both the high-level global and the low-level semantic features. It can guide NuHTC to learn nuclei instance features with less intraclass variance. We conduct extensive experiments using our method in four public multiclass nuclei instance segmentation datasets. The quantitative results of NuHTC demonstrate its superiority in both instance segmentation and classification compared to other state-of-the-art methods.
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来源期刊
Medical image analysis
Medical image analysis 工程技术-工程:生物医学
CiteScore
22.10
自引率
6.40%
发文量
309
审稿时长
6.6 months
期刊介绍: Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.
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