塞来昔布和伐地昔布与一些常见极性溶剂分子水平非共价相互作用

IF 2.9 4区 工程技术 Q1 MULTIDISCIPLINARY SCIENCES
Sneha Anna Sunny, Megha Joseph, Abdullah Yahya Abdullah Alzahrani, Ola A. Abu Ali, Samy F. Mahmoud, Renjith Thomas
{"title":"塞来昔布和伐地昔布与一些常见极性溶剂分子水平非共价相互作用","authors":"Sneha Anna Sunny, Megha Joseph, Abdullah Yahya Abdullah Alzahrani, Ola A. Abu Ali, Samy F. Mahmoud, Renjith Thomas","doi":"10.1002/adts.202500281","DOIUrl":null,"url":null,"abstract":"Celecoxib (CB) and Valdecoxib (VB) are two NSAIDs that belong to the category of anti-inflammatory drugs. They selectively inhibit the cyclooxygenase-2 enzyme and are hence used to treat several symptoms of rheumatoid and osteoarthritis. The current study focuses on investigating the interaction of these drugs with some randomly selected polar solvents explicitly. Using the M06-2x/aug-cc-pVDZ level of the theory of DFT, 12 complexes are optimized in the gas phase and their intermolecular interaction studies proceed. After the evaluation of binding energy, frontier molecular orbital analysis, and natural bond orbital analysis are carried out to get an idea of the charge localization and orbital behavior of complexes. Theoretical tools like an atom in molecule (AIM), reduced density gradient (NCI-RDG), independent gradient model based on Hirshfeld partition (IGMH), interaction region indicator (IRI), and core-valence bifurcation (CVB) index are used to identify the intermolecular interaction sites (hydrogen bond) and their strength. EDA analysis gave an idea of how the interaction energy is disseminated into various energy components. All the results obtained show that both drugs effectively interact with DMSO.","PeriodicalId":7219,"journal":{"name":"Advanced Theory and Simulations","volume":"7 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2025-04-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular Level Non-Covalent Interactions Between Celecoxib and Valdecoxib and Some Common Polar Solvents\",\"authors\":\"Sneha Anna Sunny, Megha Joseph, Abdullah Yahya Abdullah Alzahrani, Ola A. Abu Ali, Samy F. Mahmoud, Renjith Thomas\",\"doi\":\"10.1002/adts.202500281\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Celecoxib (CB) and Valdecoxib (VB) are two NSAIDs that belong to the category of anti-inflammatory drugs. They selectively inhibit the cyclooxygenase-2 enzyme and are hence used to treat several symptoms of rheumatoid and osteoarthritis. The current study focuses on investigating the interaction of these drugs with some randomly selected polar solvents explicitly. Using the M06-2x/aug-cc-pVDZ level of the theory of DFT, 12 complexes are optimized in the gas phase and their intermolecular interaction studies proceed. After the evaluation of binding energy, frontier molecular orbital analysis, and natural bond orbital analysis are carried out to get an idea of the charge localization and orbital behavior of complexes. Theoretical tools like an atom in molecule (AIM), reduced density gradient (NCI-RDG), independent gradient model based on Hirshfeld partition (IGMH), interaction region indicator (IRI), and core-valence bifurcation (CVB) index are used to identify the intermolecular interaction sites (hydrogen bond) and their strength. EDA analysis gave an idea of how the interaction energy is disseminated into various energy components. All the results obtained show that both drugs effectively interact with DMSO.\",\"PeriodicalId\":7219,\"journal\":{\"name\":\"Advanced Theory and Simulations\",\"volume\":\"7 1\",\"pages\":\"\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2025-04-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Advanced Theory and Simulations\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1002/adts.202500281\",\"RegionNum\":4,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advanced Theory and Simulations","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1002/adts.202500281","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

摘要

塞来昔布(CB)和伐地昔布(VB)是两种非甾体抗炎药,属于抗炎类药物。它们选择性地抑制环氧合酶-2酶,因此被用于治疗类风湿性关节炎和骨关节炎的几种症状。目前的研究重点是研究这些药物与一些随机选择的极性溶剂的相互作用。利用DFT理论的M06-2x/aug-cc-pVDZ水平,对12种配合物进行气相优化,并对其分子间相互作用进行了研究。在评估结合能后,进行前沿分子轨道分析和自然键轨道分析,了解配合物的电荷定位和轨道行为。利用分子中原子(AIM)、密度梯度还原(NCI-RDG)、Hirshfeld划分独立梯度模型(IGMH)、相互作用区域指示(IRI)、核价分岔(CVB)指数等理论工具识别分子间相互作用位点(氢键)及其强度。EDA分析给出了相互作用能量如何分散成各种能量分量的概念。结果表明,两种药物均能与DMSO有效相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Molecular Level Non-Covalent Interactions Between Celecoxib and Valdecoxib and Some Common Polar Solvents

Molecular Level Non-Covalent Interactions Between Celecoxib and Valdecoxib and Some Common Polar Solvents
Celecoxib (CB) and Valdecoxib (VB) are two NSAIDs that belong to the category of anti-inflammatory drugs. They selectively inhibit the cyclooxygenase-2 enzyme and are hence used to treat several symptoms of rheumatoid and osteoarthritis. The current study focuses on investigating the interaction of these drugs with some randomly selected polar solvents explicitly. Using the M06-2x/aug-cc-pVDZ level of the theory of DFT, 12 complexes are optimized in the gas phase and their intermolecular interaction studies proceed. After the evaluation of binding energy, frontier molecular orbital analysis, and natural bond orbital analysis are carried out to get an idea of the charge localization and orbital behavior of complexes. Theoretical tools like an atom in molecule (AIM), reduced density gradient (NCI-RDG), independent gradient model based on Hirshfeld partition (IGMH), interaction region indicator (IRI), and core-valence bifurcation (CVB) index are used to identify the intermolecular interaction sites (hydrogen bond) and their strength. EDA analysis gave an idea of how the interaction energy is disseminated into various energy components. All the results obtained show that both drugs effectively interact with DMSO.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Advanced Theory and Simulations
Advanced Theory and Simulations Multidisciplinary-Multidisciplinary
CiteScore
5.50
自引率
3.00%
发文量
221
期刊介绍: Advanced Theory and Simulations is an interdisciplinary, international, English-language journal that publishes high-quality scientific results focusing on the development and application of theoretical methods, modeling and simulation approaches in all natural science and medicine areas, including: materials, chemistry, condensed matter physics engineering, energy life science, biology, medicine atmospheric/environmental science, climate science planetary science, astronomy, cosmology method development, numerical methods, statistics
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信