有丝分裂检测的动态特征提取和组织病理学域移位对齐

IF 4.2 3区 计算机科学 Q2 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Jiangxiao Han, Shikang Wang, Lianjun Wu, Wenyu Liu
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引用次数: 0

摘要

有丝分裂计数在肿瘤诊断中具有重要意义;因此,有丝分裂检测是医学图像研究中的一个重要课题。有丝分裂检测的挑战在于有丝分裂和硬阴性的类内差异,即有丝分裂细胞的大小/形状差异很大,大量非有丝分裂细胞类似于有丝分裂,以及不同组织和器官、扫描仪、实验室等引起的数据集之间的组织病理学结构域转移。本文提出了一种新的域广义动态有丝分裂检测器(DGDMD),利用基于残差结构化深度卷积和域移位对齐项的动态有丝分裂特征提取器来处理有丝分裂检测中的类内方差和组织病理学域移位。所提出的动态有丝分裂特征提取器可以处理因有丝分裂细胞的大小和形状不同而引起的类内差异以及非有丝分裂的硬阴性。通过新的组织病理学-有丝分裂领域移位对齐实现的领域泛化时间表处理来自不同来源的训练和测试数据集的组织病理学幻灯片之间的领域移位。我们在MIDOG++数据集和典型的有丝分裂数据集(包括MIDOG 2021, ICPR mitosis 2014, AMIDA 2013和TUPAC 16)上验证了我们的算法在有丝分裂检测中的域泛化能力。实验结果表明,我们在MIDOG++数据集上实现了跨组织和器官有丝分裂检测领域泛化的最先进(SOTA)性能,在MIDOG 2021数据集上实现了跨扫描仪的领域泛化,在外部数据集上实现了跨数据源的领域泛化,证明了我们提出的方法在有丝分裂检测领域泛化方面的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Dynamic feature extraction and histopathology domain shift alignment for mitosis detection
Mitosis count is of crucial significance in cancer diagnosis; therefore, mitosis detection is a meaningful subject in medical image studies. The challenge of mitosis detection lies in the intra-class variance of mitosis and hard negatives, i.e., the sizes/ shapes of mitotic cells vary considerably and plenty of non-mitotic cells resemble mitosis, and the histopathology domain shift across datasets caused by different tissues and organs, scanners, labs, etc. In this paper, we propose a novel Domain Generalized Dynamic Mitosis Detector (DGDMD) to handle the intra-class variance and histopathology domain shift of mitosis detection with a dynamic mitosis feature extractor based on residual structured depth-wise convolution and domain shift alignment terms. The proposed dynamic mitosis feature extractor handles the intra-class variance caused by different sizes and shapes of mitotic cells as well as non-mitotic hard negatives. The proposed domain generalization schedule implemented via novel histopathology-mitosis domain shift alignments deals with the domain shift between histopathology slides in training and test datasets from different sources. We validate the domain generalization ability for mitosis detection of our algorithm on the MIDOG++ dataset and typical mitosis datasets, including the MIDOG 2021, ICPR MITOSIS 2014, AMIDA 2013, and TUPAC 16. Experimental results show that we achieve state-of-the-art (SOTA) performance on the MIDOG++ dataset for the domain generalization across tissue and organs of mitosis detection, across scanners on the MIDOG 2021 dataset, and across data sources on external datasets, demonstrating the effectiveness of our proposed method on the domain generalization of mitosis detection.
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来源期刊
Image and Vision Computing
Image and Vision Computing 工程技术-工程:电子与电气
CiteScore
8.50
自引率
8.50%
发文量
143
审稿时长
7.8 months
期刊介绍: Image and Vision Computing has as a primary aim the provision of an effective medium of interchange for the results of high quality theoretical and applied research fundamental to all aspects of image interpretation and computer vision. The journal publishes work that proposes new image interpretation and computer vision methodology or addresses the application of such methods to real world scenes. It seeks to strengthen a deeper understanding in the discipline by encouraging the quantitative comparison and performance evaluation of the proposed methodology. The coverage includes: image interpretation, scene modelling, object recognition and tracking, shape analysis, monitoring and surveillance, active vision and robotic systems, SLAM, biologically-inspired computer vision, motion analysis, stereo vision, document image understanding, character and handwritten text recognition, face and gesture recognition, biometrics, vision-based human-computer interaction, human activity and behavior understanding, data fusion from multiple sensor inputs, image databases.
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