利用时空特征融合进行电生理源成像的深度学习框架

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Wuxiang Shi , Yurong Li , Nan Zheng , Wenyao Hong , Zhenhua Zhao , Wensheng Chen , Xiaojing Xue , Ting Chen
{"title":"利用时空特征融合进行电生理源成像的深度学习框架","authors":"Wuxiang Shi ,&nbsp;Yurong Li ,&nbsp;Nan Zheng ,&nbsp;Wenyao Hong ,&nbsp;Zhenhua Zhao ,&nbsp;Wensheng Chen ,&nbsp;Xiaojing Xue ,&nbsp;Ting Chen","doi":"10.1016/j.cmpb.2025.108767","DOIUrl":null,"url":null,"abstract":"<div><h3>Background and Objectives</h3><div>Electrophysiological source imaging (ESI) is a challenging technique for noninvasively measuring brain activity, which involves solving a highly ill-posed inverse problem. Traditional methods attempt to address this challenge by imposing various priors, but considering the complexity and dynamic nature of the brain activity, these priors may not accurately reflect the true attributes of brain sources. In this study, we propose a novel deep learning-based framework, spatiotemporal source imaging network (SSINet), designed to provide accurate spatiotemporal estimates of brain activity using electroencephalography (EEG).</div></div><div><h3>Methods</h3><div>SSINet integrates a residual network (ResBlock) for spatial feature extraction and a bidirectional LSTM for capturing temporal dynamics, fused through a Transformer module to capture global dependencies. A channel attention mechanism is employed to prioritize active brain regions, improving both the accuracy of the model and its interpretability. Additionally, a weighted loss function is introduced to address the spatial sparsity of the brain activity.</div></div><div><h3>Results</h3><div>We evaluated the performance of SSINet through numerical simulations and found that it outperformed several state-of-the-art ESI methods across various conditions, such as varying numbers of sources, source range, and signal-to-noise ratio levels. Furthermore, SSINet demonstrated robust performance even with electrode position offsets and changes in conductivity. We also validated the model on three real EEG datasets: visual, auditory, and somatosensory stimuli. The results show that the source activity reconstructed by SSINet aligns closely with the established physiological basis of brain function.</div></div><div><h3>Conclusions</h3><div>SSINet provides accurate and stable source imaging results.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"266 ","pages":"Article 108767"},"PeriodicalIF":4.9000,"publicationDate":"2025-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A deep learning framework leveraging spatiotemporal feature fusion for electrophysiological source imaging\",\"authors\":\"Wuxiang Shi ,&nbsp;Yurong Li ,&nbsp;Nan Zheng ,&nbsp;Wenyao Hong ,&nbsp;Zhenhua Zhao ,&nbsp;Wensheng Chen ,&nbsp;Xiaojing Xue ,&nbsp;Ting Chen\",\"doi\":\"10.1016/j.cmpb.2025.108767\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background and Objectives</h3><div>Electrophysiological source imaging (ESI) is a challenging technique for noninvasively measuring brain activity, which involves solving a highly ill-posed inverse problem. Traditional methods attempt to address this challenge by imposing various priors, but considering the complexity and dynamic nature of the brain activity, these priors may not accurately reflect the true attributes of brain sources. In this study, we propose a novel deep learning-based framework, spatiotemporal source imaging network (SSINet), designed to provide accurate spatiotemporal estimates of brain activity using electroencephalography (EEG).</div></div><div><h3>Methods</h3><div>SSINet integrates a residual network (ResBlock) for spatial feature extraction and a bidirectional LSTM for capturing temporal dynamics, fused through a Transformer module to capture global dependencies. A channel attention mechanism is employed to prioritize active brain regions, improving both the accuracy of the model and its interpretability. Additionally, a weighted loss function is introduced to address the spatial sparsity of the brain activity.</div></div><div><h3>Results</h3><div>We evaluated the performance of SSINet through numerical simulations and found that it outperformed several state-of-the-art ESI methods across various conditions, such as varying numbers of sources, source range, and signal-to-noise ratio levels. Furthermore, SSINet demonstrated robust performance even with electrode position offsets and changes in conductivity. We also validated the model on three real EEG datasets: visual, auditory, and somatosensory stimuli. The results show that the source activity reconstructed by SSINet aligns closely with the established physiological basis of brain function.</div></div><div><h3>Conclusions</h3><div>SSINet provides accurate and stable source imaging results.</div></div>\",\"PeriodicalId\":10624,\"journal\":{\"name\":\"Computer methods and programs in biomedicine\",\"volume\":\"266 \",\"pages\":\"Article 108767\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2025-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer methods and programs in biomedicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169260725001841\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260725001841","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

摘要

背景与目的电生理源成像(ESI)是一项具有挑战性的无创脑活动测量技术,涉及解决一个高度不适定的逆问题。传统方法试图通过施加各种先验来解决这一挑战,但考虑到大脑活动的复杂性和动态性,这些先验可能无法准确反映脑源的真实属性。在这项研究中,我们提出了一个新的基于深度学习的框架,时空源成像网络(SSINet),旨在通过脑电图(EEG)提供准确的大脑活动时空估计。sssinet集成了用于空间特征提取的残差网络(ResBlock)和用于捕获时间动态的双向LSTM,并通过Transformer模块融合以捕获全局依赖关系。采用通道注意机制对脑活动区域进行优先排序,提高了模型的准确性和可解释性。此外,还引入了加权损失函数来处理大脑活动的空间稀疏性。我们通过数值模拟评估了SSINet的性能,发现它在各种条件下(如不同数量的源、源范围和信噪比水平)都优于几种最先进的ESI方法。此外,即使电极位置偏移和电导率变化,SSINet也表现出稳健的性能。我们还在三个真实的EEG数据集上验证了该模型:视觉、听觉和体感刺激。结果表明,SSINet重建的脑源活动与已建立的脑功能生理基础基本一致。结论sssinet提供了准确、稳定的源成像结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A deep learning framework leveraging spatiotemporal feature fusion for electrophysiological source imaging

Background and Objectives

Electrophysiological source imaging (ESI) is a challenging technique for noninvasively measuring brain activity, which involves solving a highly ill-posed inverse problem. Traditional methods attempt to address this challenge by imposing various priors, but considering the complexity and dynamic nature of the brain activity, these priors may not accurately reflect the true attributes of brain sources. In this study, we propose a novel deep learning-based framework, spatiotemporal source imaging network (SSINet), designed to provide accurate spatiotemporal estimates of brain activity using electroencephalography (EEG).

Methods

SSINet integrates a residual network (ResBlock) for spatial feature extraction and a bidirectional LSTM for capturing temporal dynamics, fused through a Transformer module to capture global dependencies. A channel attention mechanism is employed to prioritize active brain regions, improving both the accuracy of the model and its interpretability. Additionally, a weighted loss function is introduced to address the spatial sparsity of the brain activity.

Results

We evaluated the performance of SSINet through numerical simulations and found that it outperformed several state-of-the-art ESI methods across various conditions, such as varying numbers of sources, source range, and signal-to-noise ratio levels. Furthermore, SSINet demonstrated robust performance even with electrode position offsets and changes in conductivity. We also validated the model on three real EEG datasets: visual, auditory, and somatosensory stimuli. The results show that the source activity reconstructed by SSINet aligns closely with the established physiological basis of brain function.

Conclusions

SSINet provides accurate and stable source imaging results.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信