Mohamed Fakhfakh , Laurent Sarry , Patrick Clarysse
{"title":"HALSR-Net:利用混合注意和潜在空间重建改进左心室MRI的CNN分割","authors":"Mohamed Fakhfakh , Laurent Sarry , Patrick Clarysse","doi":"10.1016/j.compmedimag.2025.102546","DOIUrl":null,"url":null,"abstract":"<div><div>Accurate cardiac MRI segmentation is vital for detailed cardiac analysis, yet the manual process is labor-intensive and prone to variability. Despite advancements in MRI technology, there remains a significant need for automated methods that can reliably and efficiently segment cardiac structures. This paper introduces HALSR-Net, a novel multi-level segmentation architecture designed to improve the accuracy and reproducibility of cardiac segmentation from Cine-MRI acquisitions, focusing on the left ventricle (LV). The methodology consists of two main phases: first, the extraction of the region of interest (ROI) using a regression model that accurately predicts the location of a bounding box around the LV; second, the semantic segmentation step based on HALSR-Net architecture. This architecture incorporates a Hybrid Attention Pooling Module (HAPM) that merges attention and pooling mechanisms to enhance feature extraction and capture contextual information. Additionally, a reconstruction module leverages latent space features to further improve segmentation accuracy. Experiments conducted on an in-house clinical dataset and two public datasets (ACDC and LVQuan19) demonstrate that HALSR-Net outperforms state-of-the-art architectures, achieving up to 98% accuracy and F1-score for the segmentation of the LV cavity and myocardium. The proposed approach effectively addresses the limitations of existing methods, offering a more accurate and robust solution for cardiac MRI segmentation, thereby likely to improve cardiac function analysis and patient care.</div></div>","PeriodicalId":50631,"journal":{"name":"Computerized Medical Imaging and Graphics","volume":"123 ","pages":"Article 102546"},"PeriodicalIF":5.4000,"publicationDate":"2025-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"HALSR-Net: Improving CNN Segmentation of Cardiac Left Ventricle MRI with Hybrid Attention and Latent Space Reconstruction\",\"authors\":\"Mohamed Fakhfakh , Laurent Sarry , Patrick Clarysse\",\"doi\":\"10.1016/j.compmedimag.2025.102546\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Accurate cardiac MRI segmentation is vital for detailed cardiac analysis, yet the manual process is labor-intensive and prone to variability. Despite advancements in MRI technology, there remains a significant need for automated methods that can reliably and efficiently segment cardiac structures. This paper introduces HALSR-Net, a novel multi-level segmentation architecture designed to improve the accuracy and reproducibility of cardiac segmentation from Cine-MRI acquisitions, focusing on the left ventricle (LV). The methodology consists of two main phases: first, the extraction of the region of interest (ROI) using a regression model that accurately predicts the location of a bounding box around the LV; second, the semantic segmentation step based on HALSR-Net architecture. This architecture incorporates a Hybrid Attention Pooling Module (HAPM) that merges attention and pooling mechanisms to enhance feature extraction and capture contextual information. Additionally, a reconstruction module leverages latent space features to further improve segmentation accuracy. Experiments conducted on an in-house clinical dataset and two public datasets (ACDC and LVQuan19) demonstrate that HALSR-Net outperforms state-of-the-art architectures, achieving up to 98% accuracy and F1-score for the segmentation of the LV cavity and myocardium. The proposed approach effectively addresses the limitations of existing methods, offering a more accurate and robust solution for cardiac MRI segmentation, thereby likely to improve cardiac function analysis and patient care.</div></div>\",\"PeriodicalId\":50631,\"journal\":{\"name\":\"Computerized Medical Imaging and Graphics\",\"volume\":\"123 \",\"pages\":\"Article 102546\"},\"PeriodicalIF\":5.4000,\"publicationDate\":\"2025-04-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computerized Medical Imaging and Graphics\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0895611125000552\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computerized Medical Imaging and Graphics","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0895611125000552","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
HALSR-Net: Improving CNN Segmentation of Cardiac Left Ventricle MRI with Hybrid Attention and Latent Space Reconstruction
Accurate cardiac MRI segmentation is vital for detailed cardiac analysis, yet the manual process is labor-intensive and prone to variability. Despite advancements in MRI technology, there remains a significant need for automated methods that can reliably and efficiently segment cardiac structures. This paper introduces HALSR-Net, a novel multi-level segmentation architecture designed to improve the accuracy and reproducibility of cardiac segmentation from Cine-MRI acquisitions, focusing on the left ventricle (LV). The methodology consists of two main phases: first, the extraction of the region of interest (ROI) using a regression model that accurately predicts the location of a bounding box around the LV; second, the semantic segmentation step based on HALSR-Net architecture. This architecture incorporates a Hybrid Attention Pooling Module (HAPM) that merges attention and pooling mechanisms to enhance feature extraction and capture contextual information. Additionally, a reconstruction module leverages latent space features to further improve segmentation accuracy. Experiments conducted on an in-house clinical dataset and two public datasets (ACDC and LVQuan19) demonstrate that HALSR-Net outperforms state-of-the-art architectures, achieving up to 98% accuracy and F1-score for the segmentation of the LV cavity and myocardium. The proposed approach effectively addresses the limitations of existing methods, offering a more accurate and robust solution for cardiac MRI segmentation, thereby likely to improve cardiac function analysis and patient care.
期刊介绍:
The purpose of the journal Computerized Medical Imaging and Graphics is to act as a source for the exchange of research results concerning algorithmic advances, development, and application of digital imaging in disease detection, diagnosis, intervention, prevention, precision medicine, and population health. Included in the journal will be articles on novel computerized imaging or visualization techniques, including artificial intelligence and machine learning, augmented reality for surgical planning and guidance, big biomedical data visualization, computer-aided diagnosis, computerized-robotic surgery, image-guided therapy, imaging scanning and reconstruction, mobile and tele-imaging, radiomics, and imaging integration and modeling with other information relevant to digital health. The types of biomedical imaging include: magnetic resonance, computed tomography, ultrasound, nuclear medicine, X-ray, microwave, optical and multi-photon microscopy, video and sensory imaging, and the convergence of biomedical images with other non-imaging datasets.