{"title":"顺铂在纯和掺杂C240富勒烯中的传递:分子动力学模拟研究","authors":"Mohammad Javad Soleymani , Mohsen Abbaspour , Hamed Akbarzadeh , Sirous Salemi","doi":"10.1016/j.jmgm.2025.109047","DOIUrl":null,"url":null,"abstract":"<div><div>In this research, we have investigated the delivery of cisplatin, as the anti-cancer drug molecule encapsulated into C240 fullerene with maximum equal number of water and carbon dioxide molecules (20H<sub>2</sub>O+20CO<sub>2</sub>) by continuously increasing the temperature from 310 to 450 K. We have determined the temperature at which the fullerene broke and the drug molecule released into the outer environment. To examine the effect of B, N, and Si doping of C<sub>240</sub> fullerene on the bond break and release temperatures, we have also simulated the 20H2O+20CO2 mixture into 3 % doped (C<sub>233</sub>B<sub>7</sub>, C<sub>233</sub>N<sub>7</sub>, and C<sub>233</sub>Si<sub>7</sub>) and 20 % doped (C<sub>192</sub>B<sub>48</sub>, C<sub>192</sub>N<sub>48</sub>, and C<sub>192</sub>Si<sub>48</sub>) fullerenes at the same temperature range. Our results showed that there is not any bond break and consequently the drug release for the pure fullerene containing 20H<sub>2</sub>O+20CO<sub>2</sub> mixture at any temperature. It is also observed that the N-doped fullerene shows less resistance to the breakdown, especially the C<sub>192</sub>N<sub>48</sub> fullerene. Therefore, this N-doped C<sub>192</sub>N<sub>48</sub> fullerene is more proper compound to use in the nano drug delivery investigations using fullerene. It is also shown that the doping fullerene is a proper way to easily destruct its structure to use in the drug delivery applications. It is also shown that the self-diffusion of the cisplatin molecule is higher in the C<sub>192</sub>N<sub>48</sub> fullerene than the other systems. This result is in agreement with the other results and approves the C<sub>192</sub>N<sub>48</sub> fullerene for the drug delivery purpose.</div></div>","PeriodicalId":16361,"journal":{"name":"Journal of molecular graphics & modelling","volume":"138 ","pages":"Article 109047"},"PeriodicalIF":2.7000,"publicationDate":"2025-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Delivery of cisplatin confined into pure and doped C240 fullerene: A molecular dynamics simulation study\",\"authors\":\"Mohammad Javad Soleymani , Mohsen Abbaspour , Hamed Akbarzadeh , Sirous Salemi\",\"doi\":\"10.1016/j.jmgm.2025.109047\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>In this research, we have investigated the delivery of cisplatin, as the anti-cancer drug molecule encapsulated into C240 fullerene with maximum equal number of water and carbon dioxide molecules (20H<sub>2</sub>O+20CO<sub>2</sub>) by continuously increasing the temperature from 310 to 450 K. We have determined the temperature at which the fullerene broke and the drug molecule released into the outer environment. To examine the effect of B, N, and Si doping of C<sub>240</sub> fullerene on the bond break and release temperatures, we have also simulated the 20H2O+20CO2 mixture into 3 % doped (C<sub>233</sub>B<sub>7</sub>, C<sub>233</sub>N<sub>7</sub>, and C<sub>233</sub>Si<sub>7</sub>) and 20 % doped (C<sub>192</sub>B<sub>48</sub>, C<sub>192</sub>N<sub>48</sub>, and C<sub>192</sub>Si<sub>48</sub>) fullerenes at the same temperature range. Our results showed that there is not any bond break and consequently the drug release for the pure fullerene containing 20H<sub>2</sub>O+20CO<sub>2</sub> mixture at any temperature. It is also observed that the N-doped fullerene shows less resistance to the breakdown, especially the C<sub>192</sub>N<sub>48</sub> fullerene. Therefore, this N-doped C<sub>192</sub>N<sub>48</sub> fullerene is more proper compound to use in the nano drug delivery investigations using fullerene. It is also shown that the doping fullerene is a proper way to easily destruct its structure to use in the drug delivery applications. It is also shown that the self-diffusion of the cisplatin molecule is higher in the C<sub>192</sub>N<sub>48</sub> fullerene than the other systems. This result is in agreement with the other results and approves the C<sub>192</sub>N<sub>48</sub> fullerene for the drug delivery purpose.</div></div>\",\"PeriodicalId\":16361,\"journal\":{\"name\":\"Journal of molecular graphics & modelling\",\"volume\":\"138 \",\"pages\":\"Article 109047\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of molecular graphics & modelling\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S109332632500107X\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of molecular graphics & modelling","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S109332632500107X","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Delivery of cisplatin confined into pure and doped C240 fullerene: A molecular dynamics simulation study
In this research, we have investigated the delivery of cisplatin, as the anti-cancer drug molecule encapsulated into C240 fullerene with maximum equal number of water and carbon dioxide molecules (20H2O+20CO2) by continuously increasing the temperature from 310 to 450 K. We have determined the temperature at which the fullerene broke and the drug molecule released into the outer environment. To examine the effect of B, N, and Si doping of C240 fullerene on the bond break and release temperatures, we have also simulated the 20H2O+20CO2 mixture into 3 % doped (C233B7, C233N7, and C233Si7) and 20 % doped (C192B48, C192N48, and C192Si48) fullerenes at the same temperature range. Our results showed that there is not any bond break and consequently the drug release for the pure fullerene containing 20H2O+20CO2 mixture at any temperature. It is also observed that the N-doped fullerene shows less resistance to the breakdown, especially the C192N48 fullerene. Therefore, this N-doped C192N48 fullerene is more proper compound to use in the nano drug delivery investigations using fullerene. It is also shown that the doping fullerene is a proper way to easily destruct its structure to use in the drug delivery applications. It is also shown that the self-diffusion of the cisplatin molecule is higher in the C192N48 fullerene than the other systems. This result is in agreement with the other results and approves the C192N48 fullerene for the drug delivery purpose.
期刊介绍:
The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design.
As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.