增强肺炎多病灶分割的三维全局和局部特征提取

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Huiyao He, Yinwei Zhan, Yulan Yan, Yuefu Zhan
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引用次数: 0

摘要

利用深度学习进行肺炎病灶的精确分割一直是医学图像分割的研究热点,其中卷积神经网络(cnn)擅长通过卷积层捕获局部特征,但在获取全局信息方面存在困难,而变形金刚(Transformers)擅长处理全局特征和远程依赖关系,但需要大量的计算资源和数据。受最近引入的Mamba的激励,我们开发了一种新的网络架构,以同时增强对全局和局部特征的处理。它集成了增强的Mamba模块SE3DMamba来改进三维全局特征的提取,集成了医学版的深度残差卷积MDRConv,通过自配置机制来增强局部特征的提取。在两个肺炎CT数据集上进行的实验表明,我们的网络在所有任务上都超过了最先进的基于CNN和transformer的分割模型,提高了深度学习用于肺炎多病变分割的临床可行性。这两个数据集包括包含三种病变类型(实变、结节和空洞)的肺炎多病变分割数据集(PMLSegData)和包含毛玻璃混浊的MosMedData。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Enhancing 3D Global and Local Feature Extraction for Pneumonia Multilesion Segmentation

Precise segmentation of pneumonia lesions using deep learning has been a research focus in medical image segmentation, in which convolutional neural networks (CNNs) excel at capturing local features through convolutional layers but struggle with global information, while Transformers handle global features and long-range dependencies well but require substantial computational resources and data. Motivated by the recently introduced Mamba that effectively models long-range dependencies with less complexity, we develop a novel network architecture in order to simultaneously enhance the handling of both global and local features. It integrates an enhanced Mamba module SE3DMamba to improve the extraction of three-dimensional global features and a medical version of deep residual convolution MDRConv to enhance the extraction of local features with a self-configuring mechanism. Experiments conducted on two pneumonia CT datasets, including the pneumonia multilesion segmentation dataset (PMLSegData) with three lesion types—consolidations, nodules, and cavities—and MosMedData of ground-glass opacifications demonstrate that our network surpasses state-of-the-art CNN and Transformer-based segmentation models across all tasks, advancing the clinical feasibility of deep learning for pneumonia multilesion segmentation.

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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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