Ola Grabowska , Małgorzata M. Kogut-Günthel , Sergey A. Samsonov , Dariusz Wyrzykowski , Joanna Makowska
{"title":"β-环糊精将溶菌酶从1-烷基磺酸盐的魔爪中拯救出来","authors":"Ola Grabowska , Małgorzata M. Kogut-Günthel , Sergey A. Samsonov , Dariusz Wyrzykowski , Joanna Makowska","doi":"10.1016/j.molliq.2025.127543","DOIUrl":null,"url":null,"abstract":"<div><div>Non-covalent interactions between proteins and small molecules are one of the factors, along with pH and temperature, that have a significant impact on protein function, stability and biological activity. Reversible protein folding induced by molecular crowding can be controlled by introducing ligands that compete with the protein for small molecules. One example is lysozyme (Lys), which unfolds in the presence of ligands that contain hydrophobic groups in their structure, such as 1-alkylsulfonates (KXS). In this paper, a series of experimental methods, namely circular dichroism spectroscopy, isothermal titration calorimetry, conductometric titration and differential scanning calorimetry, supported by <em>in silico</em> analysis, have been applied to characterise the process of reversibility changes of lysozyme structure in the presence of 1-alkylsulfonates with different hydrophobic chain lengths and <em>β</em>-cyclodextrin (<em>β</em>-CD) used as a strong competitive KXS-binding ligand. It has been shown that the observed structural changes can be reversed by introducing <em>β</em>-CD into the system, which, due to its higher affinity for KXS in comparison to lysozyme, effectively binds small ligands and so allows the protein to refold.</div></div>","PeriodicalId":371,"journal":{"name":"Journal of Molecular Liquids","volume":"428 ","pages":"Article 127543"},"PeriodicalIF":5.3000,"publicationDate":"2025-04-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"β-cyclodextrin saves lysozyme from the clutches of 1-alkylsulfonates\",\"authors\":\"Ola Grabowska , Małgorzata M. Kogut-Günthel , Sergey A. Samsonov , Dariusz Wyrzykowski , Joanna Makowska\",\"doi\":\"10.1016/j.molliq.2025.127543\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Non-covalent interactions between proteins and small molecules are one of the factors, along with pH and temperature, that have a significant impact on protein function, stability and biological activity. Reversible protein folding induced by molecular crowding can be controlled by introducing ligands that compete with the protein for small molecules. One example is lysozyme (Lys), which unfolds in the presence of ligands that contain hydrophobic groups in their structure, such as 1-alkylsulfonates (KXS). In this paper, a series of experimental methods, namely circular dichroism spectroscopy, isothermal titration calorimetry, conductometric titration and differential scanning calorimetry, supported by <em>in silico</em> analysis, have been applied to characterise the process of reversibility changes of lysozyme structure in the presence of 1-alkylsulfonates with different hydrophobic chain lengths and <em>β</em>-cyclodextrin (<em>β</em>-CD) used as a strong competitive KXS-binding ligand. It has been shown that the observed structural changes can be reversed by introducing <em>β</em>-CD into the system, which, due to its higher affinity for KXS in comparison to lysozyme, effectively binds small ligands and so allows the protein to refold.</div></div>\",\"PeriodicalId\":371,\"journal\":{\"name\":\"Journal of Molecular Liquids\",\"volume\":\"428 \",\"pages\":\"Article 127543\"},\"PeriodicalIF\":5.3000,\"publicationDate\":\"2025-04-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Liquids\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S016773222500710X\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Liquids","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S016773222500710X","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
β-cyclodextrin saves lysozyme from the clutches of 1-alkylsulfonates
Non-covalent interactions between proteins and small molecules are one of the factors, along with pH and temperature, that have a significant impact on protein function, stability and biological activity. Reversible protein folding induced by molecular crowding can be controlled by introducing ligands that compete with the protein for small molecules. One example is lysozyme (Lys), which unfolds in the presence of ligands that contain hydrophobic groups in their structure, such as 1-alkylsulfonates (KXS). In this paper, a series of experimental methods, namely circular dichroism spectroscopy, isothermal titration calorimetry, conductometric titration and differential scanning calorimetry, supported by in silico analysis, have been applied to characterise the process of reversibility changes of lysozyme structure in the presence of 1-alkylsulfonates with different hydrophobic chain lengths and β-cyclodextrin (β-CD) used as a strong competitive KXS-binding ligand. It has been shown that the observed structural changes can be reversed by introducing β-CD into the system, which, due to its higher affinity for KXS in comparison to lysozyme, effectively binds small ligands and so allows the protein to refold.
期刊介绍:
The journal includes papers in the following areas:
– Simple organic liquids and mixtures
– Ionic liquids
– Surfactant solutions (including micelles and vesicles) and liquid interfaces
– Colloidal solutions and nanoparticles
– Thermotropic and lyotropic liquid crystals
– Ferrofluids
– Water, aqueous solutions and other hydrogen-bonded liquids
– Lubricants, polymer solutions and melts
– Molten metals and salts
– Phase transitions and critical phenomena in liquids and confined fluids
– Self assembly in complex liquids.– Biomolecules in solution
The emphasis is on the molecular (or microscopic) understanding of particular liquids or liquid systems, especially concerning structure, dynamics and intermolecular forces. The experimental techniques used may include:
– Conventional spectroscopy (mid-IR and far-IR, Raman, NMR, etc.)
– Non-linear optics and time resolved spectroscopy (psec, fsec, asec, ISRS, etc.)
– Light scattering (Rayleigh, Brillouin, PCS, etc.)
– Dielectric relaxation
– X-ray and neutron scattering and diffraction.
Experimental studies, computer simulations (MD or MC) and analytical theory will be considered for publication; papers just reporting experimental results that do not contribute to the understanding of the fundamentals of molecular and ionic liquids will not be accepted. Only papers of a non-routine nature and advancing the field will be considered for publication.