Q1 Pharmacology, Toxicology and Pharmaceutics
Advances in pharmacology Pub Date : 2025-01-01 Epub Date: 2025-02-19 DOI:10.1016/bs.apha.2025.02.002
Souvik Sur, Hemlata Nimesh
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引用次数: 0

摘要

药物设计中的分子模型或计算机辅助药物设计(CADD)在当今世界的新药鉴定中发挥着重要作用。然而,由于理论模型涉及假设和近似,因此具有灵敏度方面的挑战和局限性。例如,分子对接或分子动力学模拟模型可能无法代表准确的生物系统,因此预测结果可能是错误的。CADD 依赖于目标蛋白质和配体准确、高质量的结构信息。遗憾的是,有时无法获得实验结构,只能使用同源模型,而同源模型可能并不精确。计算成本是另一个缺点;只有高精度模拟才需要大量的计算能力和时间,非常适合筛选大量药物。此外,它们在确定影响药物性能和有效性的化合物药代动力学和毒性模式方面也存在弱点。换句话说,尽管 CADD 对药物发现有很大帮助,但要解决其缺点并优化其预测效果,它仍然受到实验验证的限制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Challenges and limitations of computer-aided drug design.

Molecular Modelling in Drug Designing or Computer Aided Drug Designing (CADD) plays a significant role in new drug identification in the current world. However, it has sensitivity challenges and limitation because theoretical models involve assumption and approximations Computational models are not very accurate, some of the major challenges that face these models include the following. These include, for instance, molecular-docking or molecular-dynamics-simulation models which may not represent an accurate biological system and thus the predictions will be wrong. CADD depends on the availability of accurate, high-quality structural information for target proteins and ligand. Unfortunately, there are instances when experimental structures are not available, and homology models are employed, which can be imprecise. The computational cost is another drawback; only high accuracy simulations call for huge amounts of computational power and time well-suited for screening a multitude of agents. Moreover, they have weaknesses in determining pharmacokinetic and toxicity patterns of compounds that influence drug performance and effectiveness. In other words, even though CADD greatly helps drug discovery, it is still constrained by experimental validation to solve its drawbacks and optimize its foretelling.

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来源期刊
Advances in pharmacology
Advances in pharmacology Pharmacology, Toxicology and Pharmaceutics-Pharmacology
CiteScore
9.10
自引率
0.00%
发文量
45
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