4-羟基-3,5-二甲基-氧苯甲醛(6-氯吡啶嗪-3-基)一水合腙的合成、晶体结构及硅内分子对接研究

IF 0.6 Q4 CRYSTALLOGRAPHY
Muhammed Rafi Ummer , M. NizamMohideen , Mohammed Nazrudeen Noorulla , Abubacker Sidhik Moolan Khaja
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引用次数: 0

摘要

报道了4-羟基-3,5-二甲基-氧基苯甲醛(6-氯吡嗪-3-基)水合腙的合成、分子x射线结构和硅EGFR与HER2分子对接研究。该水合肼通过与醛功能的联合剂缩合而成一种新的含丁香醛的吡嗪类化合物。在标题化合物C13H13ClN4O3·H2O中,有机分子对腙桥的C=N键具有E构型。苯基环和吡啶环与芳香环的平均面夹角为2.1(1)°,腙部分与芳香环的平均面夹角为1.6(2)°和3.0(2)°。这使得整个分子相对平坦。C-H⋯N氢键产生具有大R22(14)环基序的反转二聚体。在这个环内,进一步的C-H⋯N氢键建立了一个更小的R22(8)环。二聚体的分子因此被四个氢键牢牢地连接在一起。在水氢原子与相邻分子的羟基和甲基氧原子之间形成分叉的O - h⋯(O,O)氢键,导致形成R21(5)成员环。C-H⋯π和面对面的π -π堆叠相互作用也存在于二维框架中,这可能与包装有关。在一项补充分析中,该化合物与EGFR和HER2受体进行了硅对接,结果表明该化合物优先靶向EGFR而不是HER2。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Synthesis, crystal structure, and in silico mol­ecular docking studies of 4-hy­droxy-3,5-di­meth­oxy­benzaldehyde (6-chloro­pyridazin-3-yl)hydrazone monohydrate
The synthesis, mol­ecular X-ray structure and in silico EGFR and HER2 mol­ecular docking studies are reported for 4-hy­droxy-3,5-di­meth­oxy­benzaldehyde (6-chloro­pyridazin-3-yl)hydrazone hydrate, which constitutes a new pyridazine-based compound incorporating a syringaldehyde moiety by condensation of the hydrazine linker with the aldehyde function.
In the title compound, C13H13ClN4O3·H2O, the organic mol­ecule has an E configuration with regard to the C=N bond of the hydrazone bridge. The phenyl and pyridazine rings subtend a dihedral angle of 2.1 (1)° between their mean planes, while the hydrazone moiety makes dihedral angles of 1.6 (2) and 3.0 (2)°, respectively, with these aromatic rings. This renders the entire mol­ecule comparably flat. A C—H⋯N hydrogen bond generates an inversion dimer with a large R22(14) ring motif. Within this ring, a further C—H⋯N hydrogen bond establishes a smaller R22(8) ring. The mol­ecules of a dimer are thereby firmly linked by four hydrogen bonds. A bifurcated O—H⋯(O,O) hydrogen bond is formed between a water hydrogen atom and the hydroxyl and meth­oxy oxygen atoms of an adjacent mol­ecule, leading to the formation of an R21(5) membered ring. C—H⋯π and face-to-face π–π stacking inter­actions are also present in the two-dimensional framework, which may be of relevance for the packing. In a complementary analysis, the compound was docked in silico to EGFR and HER2 receptors and the results imply that the compound targets EGFR preferentially over HER2.
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来源期刊
CiteScore
1.90
自引率
0.00%
发文量
351
审稿时长
3 weeks
期刊介绍: Acta Crystallographica Section E: Crystallographic Communications is the IUCr''s open-access structural communications journal. It provides a fast, simple and easily accessible publication mechanism for crystal structure determinations of inorganic, metal-organic and organic compounds. The electronic submission, validation, refereeing and publication facilities of the journal ensure rapid and high-quality publication of fully validated structures. The primary article category is Research Communications; these are peer-reviewed articles describing one or more structure determinations with appropriate discussion of the science.
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