在Hirshfeld原子精化中有效核心电位的使用:在NoSpherA2中使量子晶体学更快。

IF 6.1 3区 材料科学 Q1 Biochemistry, Genetics and Molecular Biology
Journal of Applied Crystallography Pub Date : 2025-03-07 eCollection Date: 2025-04-01 DOI:10.1107/S1600576725000901
Florian Kleemiss, Florian Meurer, Ilya G Shenderovich, Michael Bodensteiner
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引用次数: 0

摘要

采用非球面散射因子对x射线衍射数据进行结构模型的精密度和准确度有显著的提高。定制的散射因子可从量子化学计算的电子密度使用常规计算包。在这个过程中,特别是重元素,由于它们大量的电子不参与化学键,因此造成了困难。一种巧妙的规避方法是利用有效的核心潜能。本研究为Hirshfeld原子精化等先进的结构精化方法提供了一种处理这些缺失电子的方法。它还提供了示例和基准,演示了在不影响准确性的情况下将优化时间减少两倍。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The use of effective core potentials in Hirshfeld atom refinement: making quantum crystallography faster in NoSpherA2.

The refinement of structural models against X-ray diffraction data benefits significantly from employing non-spherical scattering factors in terms of precision and accuracy. Tailor-made scattering factors are available from quantum chemical calculations of the electron density using routine calculation packages. In this process, heavy elements in particular pose a difficulty due to their large numbers of electrons which are not involved in chemical bonding. An elegant way to circumvent this is by using effective core potentials. This work presents an approach for the treatment of these missing electrons in advanced structural refinement methods, such as Hirshfeld atom refinement. It also provides examples and benchmarks demonstrating up to a twofold reduction in refinement time without compromising on accuracy.

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来源期刊
CiteScore
10.00
自引率
3.30%
发文量
178
审稿时长
4.7 months
期刊介绍: Many research topics in condensed matter research, materials science and the life sciences make use of crystallographic methods to study crystalline and non-crystalline matter with neutrons, X-rays and electrons. Articles published in the Journal of Applied Crystallography focus on these methods and their use in identifying structural and diffusion-controlled phase transformations, structure-property relationships, structural changes of defects, interfaces and surfaces, etc. Developments of instrumentation and crystallographic apparatus, theory and interpretation, numerical analysis and other related subjects are also covered. The journal is the primary place where crystallographic computer program information is published.
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