羰基在甲氧基查尔酮中的关键作用:结构的综合分析和对单胺氧化酶结合亲和力的计算见解†

IF 3.2 3区 工程技术 Q2 CHEMISTRY, PHYSICAL
Keshav Kumar Harish, Hussien Ahmed Khamees, Keerthikumara Venkatesha, Omantheswara Nagaraja and Mahendra Madegowda
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引用次数: 0

摘要

本研究对两个甲氧基查尔酮结构(HK1和HK2)进行了全面的研究,每个结构都具有不同的卤素取代基(氯和溴)。通过x射线单晶衍射(XRD)对衍生物的晶体进行了生长和确认,结果表明HK1在正交晶系中与空间群Pbca结晶,而HK2在单斜晶系中与空间群P21/c结晶。分子间的相互作用,如氢键,π -π堆叠和范德华力,研究了它们在分子组装中的作用。Hirshfeld表面分析和富集比为晶格内的分子间相互作用提供了进一步的见解。采用B3LYP泛函和6-311++G (d,p)基集进行密度泛函理论(DFT)计算,探讨了其电子结构和理化性质。分子原子量子理论(QTAIM)和非共价相互作用(NCI)分析阐明了这些化合物的拓扑结构。对其衍生物进行了硅生物学研究,重点研究了它们对单胺氧化酶(MAO-A和MAO-B)酶的抑制潜力。通过ADME-T分析预测来评估药物相似性,随后进行分子对接和动力学模拟,以确定MAOs内有利的结合构型。100 ns周期内的动力学模拟证实了配体-蛋白复合物的稳定性。总的来说,本研究通过分子相互作用对其化学和生物学特性提供了有价值的见解,从而对所报道的分子的结构复杂性有了更深入的了解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The pivotal role of the carbonyl group in methoxy chalcones: comprehensive analyses of the structure and computational insights into binding affinity towards monoamine oxidase enzymes†

The pivotal role of the carbonyl group in methoxy chalcones: comprehensive analyses of the structure and computational insights into binding affinity towards monoamine oxidase enzymes†

The present study explores the comprehensive investigations of two methoxy-oriented chalcone structures (HK1 and HK2), each featuring distinct halogen substituents (chlorine and bromine). The crystals of the derivatives were grown and confirmed via single-crystal X-ray diffraction (XRD), revealing that HK1 crystallizes in the orthorhombic system with the space group Pbca, while HK2 crystallizes in the monoclinic system with the space group P21/c. Intermolecular interactions, such as hydrogen bonding, π–π stacking, and van der Waals forces, were examined for their role in molecular assembly. Hirshfeld surface analysis and enrichment ratio provided further insights into these intermolecular interactions within the lattice. Density functional theory (DFT) calculations using the B3LYP functional and 6-311++G (d,p) basis set was employed to explore the electronic structure and physicochemical properties. Quantum theory of atoms in molecules (QTAIM) and non-covalent interaction (NCI) analyses elucidated the topology of these compounds. In silico biological studies of the derivatives were also carried out, focusing on their inhibitory potential targeting monoamine oxidase (MAO-A and MAO-B) enzymes. Drug-likeness was evaluated through ADME-T profiling predictions, followed by molecular docking and dynamics simulations to determine the favorable binding configurations within the MAOs. Dynamics simulations over a 100 ns period confirmed the stability of the ligand–protein complexes. Overall, the present study offers a deeper understanding of the structural intricacies of the reported molecules by providing valuable insights into their chemical and biological properties through molecular interactions.

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来源期刊
Molecular Systems Design & Engineering
Molecular Systems Design & Engineering Engineering-Biomedical Engineering
CiteScore
6.40
自引率
2.80%
发文量
144
期刊介绍: Molecular Systems Design & Engineering provides a hub for cutting-edge research into how understanding of molecular properties, behaviour and interactions can be used to design and assemble better materials, systems, and processes to achieve specific functions. These may have applications of technological significance and help address global challenges.
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