一种使用预测ResNet模型权重和特征图生成复发性宫颈癌描述性图像的简单方法的讨论。

IF 2.2 4区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Destie Provenzano, Jeffrey Wang, Sharad Goyal, Yuan James Rao
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引用次数: 0

摘要

背景:残差神经网络(ResNets)等预测模型可以利用磁共振成像(MRI)数据准确识别放疗后可能复发的宫颈肿瘤。然而,仍然缺乏对模型选择(可解释性)的了解。在本研究中,我们探讨了是否可以使用模型特征来生成模拟图像,作为模型可解释性的一种方法。方法:从TCGA-CESC数据库中收集27例接受放疗的宫颈癌患者的T2W MRI数据。模拟图像生成如下:[A]训练ResNet模型识别复发性宫颈癌;[B]对被试T2W MRI数据进行模型评估,得到相应的特征图;[C]为每张图像确定最重要的特征图;[D]将所有图像的特征图结合起来生成模拟图像;[E]最后的图像由放射肿瘤学家检查,并通过初始算法确定复发的可能性。结果:使用来自ResNet模型的预测特征图(准确率为93%)生成模拟图像。通过模型的模拟图像可以识别放射治疗后复发和非复发的宫颈肿瘤。一位放射肿瘤学家将模拟图像识别为具有侵袭性宫颈癌特征的子宫颈肿瘤。这些图像还包含多个被认为与临床无关的MRI特征。结论:这种简单的方法能够生成模拟复发和非复发宫颈癌肿瘤图像的模拟MRI数据。这些生成的图像可用于评估预测模型的可解释性,并协助放射科医生识别可能预测疾病病程的特征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Discussion of a Simple Method to Generate Descriptive Images Using Predictive ResNet Model Weights and Feature Maps for Recurrent Cervix Cancer.

Background: Predictive models like Residual Neural Networks (ResNets) can use Magnetic Resonance Imaging (MRI) data to identify cervix tumors likely to recur after radiotherapy (RT) with high accuracy. However, there persists a lack of insight into model selections (explainability). In this study, we explored whether model features could be used to generate simulated images as a method of model explainability.

Methods: T2W MRI data were collected for twenty-seven women with cervix cancer who received RT from the TCGA-CESC database. Simulated images were generated as follows: [A] a ResNet model was trained to identify recurrent cervix cancer; [B] a model was evaluated on T2W MRI data for subjects to obtain corresponding feature maps; [C] most important feature maps were determined for each image; [D] feature maps were combined across all images to generate a simulated image; [E] the final image was reviewed by a radiation oncologist and an initial algorithm to identify the likelihood of recurrence.

Results: Predictive feature maps from the ResNet model (93% accuracy) were used to generate simulated images. Simulated images passed through the model were identified as recurrent and non-recurrent cervix tumors after radiotherapy. A radiation oncologist identified the simulated images as cervix tumors with characteristics of aggressive Cervical Cancer. These images also contained multiple MRI features not considered clinically relevant.

Conclusion: This simple method was able to generate simulated MRI data that mimicked recurrent and non-recurrent cervix cancer tumor images. These generated images could be useful for evaluating the explainability of predictive models and to assist radiologists with the identification of features likely to predict disease course.

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来源期刊
Tomography
Tomography Medicine-Radiology, Nuclear Medicine and Imaging
CiteScore
2.70
自引率
10.50%
发文量
222
期刊介绍: TomographyTM publishes basic (technical and pre-clinical) and clinical scientific articles which involve the advancement of imaging technologies. Tomography encompasses studies that use single or multiple imaging modalities including for example CT, US, PET, SPECT, MR and hyperpolarization technologies, as well as optical modalities (i.e. bioluminescence, photoacoustic, endomicroscopy, fiber optic imaging and optical computed tomography) in basic sciences, engineering, preclinical and clinical medicine. Tomography also welcomes studies involving exploration and refinement of contrast mechanisms and image-derived metrics within and across modalities toward the development of novel imaging probes for image-based feedback and intervention. The use of imaging in biology and medicine provides unparalleled opportunities to noninvasively interrogate tissues to obtain real-time dynamic and quantitative information required for diagnosis and response to interventions and to follow evolving pathological conditions. As multi-modal studies and the complexities of imaging technologies themselves are ever increasing to provide advanced information to scientists and clinicians. Tomography provides a unique publication venue allowing investigators the opportunity to more precisely communicate integrated findings related to the diverse and heterogeneous features associated with underlying anatomical, physiological, functional, metabolic and molecular genetic activities of normal and diseased tissue. Thus Tomography publishes peer-reviewed articles which involve the broad use of imaging of any tissue and disease type including both preclinical and clinical investigations. In addition, hardware/software along with chemical and molecular probe advances are welcome as they are deemed to significantly contribute towards the long-term goal of improving the overall impact of imaging on scientific and clinical discovery.
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