FLVCR1作为他汀类药物相关性糖尿病铁代谢相关基因的鉴定

IF 3.1 3区 医学 Q2 ENDOCRINOLOGY & METABOLISM
YiJia Huang, Kai Chen, Xiao Xiao, Shilong Zhong
{"title":"FLVCR1作为他汀类药物相关性糖尿病铁代谢相关基因的鉴定","authors":"YiJia Huang, Kai Chen, Xiao Xiao, Shilong Zhong","doi":"10.1007/s00592-025-02491-6","DOIUrl":null,"url":null,"abstract":"<p><strong>Aims: </strong>Long-term statin use has been linked to increased diabetes risk. Iron metabolism disruption may explain this association. The objective of this study was to identify the co-expression gene modules and the iron metabolism-related gene (IMG) linking statin administration and diabetes, making the hunt for novel therapeutic targets necessary.</p><p><strong>Methods: </strong>Weighted gene co-expression network analysis (WGCNA) was applied to the GSE130991 dataset to detect co-expressed gene modules. Enrichment analysis and single sample gene set enrichment analysis (ssGSEA) were conducted to characterize the biological processes and iron metabolism differences, respectively. Candidate IMGs were identified by intersecting WGCNA hub genes, differentially expressed genes (DEGs) from the statin-using and non-using obese individuals within the GSE130991 liver tissue dataset, and IMGs from Molecular Signatures Database Molecular Signatures Database (MisgDB). Mediation analysis was utilized to identify the definitive IMG. Expression validation was conducted through reverse transcription quantitative PCR (RT-qPCR) experiments and cross-referencing with additional datasets.</p><p><strong>Results: </strong>A shared gene module was identified between statin-users and diabetes patients, with functional enrichment analysis indicating involvement in iron ion binding. ssGSEA revealed differentially expressed iron metabolism in both statin-users and diabetes patients. Five IMG genes (CYP51A1, SC5D, MSMO1, SCD, and FLVCR1) were shortlisted, with FLVCR1 emerging as the key intermediary biomarker. FLVCR1 was positively correlated with insulin resistance and demonstrated robust predictive capabilities for diabetes. An increase in FLVCR1 mRNA levels was observed following statin treatment, as confirmed by RT-qPCR experiments and the GSE24188 dataset. Elevated FLVCR1 mRNA was also noted in diabetes patients across datasets GSE130991, GSE23343, and GSE95849.</p><p><strong>Conclusion: </strong>In this study, bioinformatics evidence supporting the association between statin use and diabetes was presented. FLVCR1 was identified as the iron metabolism-related mediator gene implicated in this relationship. Overall, our findings provide a theoretical foundation for new directions for future research exploring the complex interplay between statin treatment, iron metabolism regulation, and diabetes pathogenesis.</p>","PeriodicalId":6921,"journal":{"name":"Acta Diabetologica","volume":" ","pages":""},"PeriodicalIF":3.1000,"publicationDate":"2025-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of FLVCR1 as the iron metabolism-related gene of statin-associated diabetes.\",\"authors\":\"YiJia Huang, Kai Chen, Xiao Xiao, Shilong Zhong\",\"doi\":\"10.1007/s00592-025-02491-6\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Aims: </strong>Long-term statin use has been linked to increased diabetes risk. Iron metabolism disruption may explain this association. The objective of this study was to identify the co-expression gene modules and the iron metabolism-related gene (IMG) linking statin administration and diabetes, making the hunt for novel therapeutic targets necessary.</p><p><strong>Methods: </strong>Weighted gene co-expression network analysis (WGCNA) was applied to the GSE130991 dataset to detect co-expressed gene modules. Enrichment analysis and single sample gene set enrichment analysis (ssGSEA) were conducted to characterize the biological processes and iron metabolism differences, respectively. Candidate IMGs were identified by intersecting WGCNA hub genes, differentially expressed genes (DEGs) from the statin-using and non-using obese individuals within the GSE130991 liver tissue dataset, and IMGs from Molecular Signatures Database Molecular Signatures Database (MisgDB). Mediation analysis was utilized to identify the definitive IMG. Expression validation was conducted through reverse transcription quantitative PCR (RT-qPCR) experiments and cross-referencing with additional datasets.</p><p><strong>Results: </strong>A shared gene module was identified between statin-users and diabetes patients, with functional enrichment analysis indicating involvement in iron ion binding. ssGSEA revealed differentially expressed iron metabolism in both statin-users and diabetes patients. Five IMG genes (CYP51A1, SC5D, MSMO1, SCD, and FLVCR1) were shortlisted, with FLVCR1 emerging as the key intermediary biomarker. FLVCR1 was positively correlated with insulin resistance and demonstrated robust predictive capabilities for diabetes. An increase in FLVCR1 mRNA levels was observed following statin treatment, as confirmed by RT-qPCR experiments and the GSE24188 dataset. Elevated FLVCR1 mRNA was also noted in diabetes patients across datasets GSE130991, GSE23343, and GSE95849.</p><p><strong>Conclusion: </strong>In this study, bioinformatics evidence supporting the association between statin use and diabetes was presented. FLVCR1 was identified as the iron metabolism-related mediator gene implicated in this relationship. Overall, our findings provide a theoretical foundation for new directions for future research exploring the complex interplay between statin treatment, iron metabolism regulation, and diabetes pathogenesis.</p>\",\"PeriodicalId\":6921,\"journal\":{\"name\":\"Acta Diabetologica\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2025-03-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Diabetologica\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1007/s00592-025-02491-6\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENDOCRINOLOGY & METABOLISM\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Diabetologica","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/s00592-025-02491-6","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENDOCRINOLOGY & METABOLISM","Score":null,"Total":0}
引用次数: 0

摘要

目的:长期使用他汀类药物会增加患糖尿病的风险。铁代谢紊乱可以解释这种关联。本研究的目的是鉴定将他汀类药物与糖尿病联系起来的共表达基因模块和铁代谢相关基因(IMG),从而有必要寻找新的治疗靶点。方法:采用加权基因共表达网络分析(WGCNA)对GSE130991数据集进行共表达基因模块检测。富集分析和单样本基因集富集分析(ssGSEA)分别表征生物过程和铁代谢差异。候选img通过交叉WGCNA中心基因、GSE130991肝组织数据集中使用他汀类药物和未使用他汀类药物的肥胖个体的差异表达基因(deg)以及来自分子特征数据库分子特征数据库(MisgDB)的img来鉴定。使用中介分析来确定最终的IMG。通过反转录定量PCR (RT-qPCR)实验和与其他数据集交叉对照进行表达验证。结果:在他汀类药物使用者和糖尿病患者之间发现了一个共享的基因模块,功能富集分析表明参与了铁离子结合。ssGSEA显示他汀类药物使用者和糖尿病患者铁代谢表达差异。5个IMG基因(CYP51A1、SC5D、MSMO1、SCD和FLVCR1)入围,FLVCR1成为关键的中间生物标志物。FLVCR1与胰岛素抵抗正相关,并显示出对糖尿病的强大预测能力。RT-qPCR实验和GSE24188数据集证实,他汀类药物治疗后FLVCR1 mRNA水平升高。在数据集GSE130991、GSE23343和GSE95849的糖尿病患者中也发现了FLVCR1 mRNA的升高。结论:本研究提供了支持他汀类药物使用与糖尿病相关的生物信息学证据。FLVCR1被认为是铁代谢相关的中介基因。总之,我们的研究结果为未来探索他汀类药物治疗、铁代谢调节和糖尿病发病机制之间复杂的相互作用提供了新的研究方向。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of FLVCR1 as the iron metabolism-related gene of statin-associated diabetes.

Aims: Long-term statin use has been linked to increased diabetes risk. Iron metabolism disruption may explain this association. The objective of this study was to identify the co-expression gene modules and the iron metabolism-related gene (IMG) linking statin administration and diabetes, making the hunt for novel therapeutic targets necessary.

Methods: Weighted gene co-expression network analysis (WGCNA) was applied to the GSE130991 dataset to detect co-expressed gene modules. Enrichment analysis and single sample gene set enrichment analysis (ssGSEA) were conducted to characterize the biological processes and iron metabolism differences, respectively. Candidate IMGs were identified by intersecting WGCNA hub genes, differentially expressed genes (DEGs) from the statin-using and non-using obese individuals within the GSE130991 liver tissue dataset, and IMGs from Molecular Signatures Database Molecular Signatures Database (MisgDB). Mediation analysis was utilized to identify the definitive IMG. Expression validation was conducted through reverse transcription quantitative PCR (RT-qPCR) experiments and cross-referencing with additional datasets.

Results: A shared gene module was identified between statin-users and diabetes patients, with functional enrichment analysis indicating involvement in iron ion binding. ssGSEA revealed differentially expressed iron metabolism in both statin-users and diabetes patients. Five IMG genes (CYP51A1, SC5D, MSMO1, SCD, and FLVCR1) were shortlisted, with FLVCR1 emerging as the key intermediary biomarker. FLVCR1 was positively correlated with insulin resistance and demonstrated robust predictive capabilities for diabetes. An increase in FLVCR1 mRNA levels was observed following statin treatment, as confirmed by RT-qPCR experiments and the GSE24188 dataset. Elevated FLVCR1 mRNA was also noted in diabetes patients across datasets GSE130991, GSE23343, and GSE95849.

Conclusion: In this study, bioinformatics evidence supporting the association between statin use and diabetes was presented. FLVCR1 was identified as the iron metabolism-related mediator gene implicated in this relationship. Overall, our findings provide a theoretical foundation for new directions for future research exploring the complex interplay between statin treatment, iron metabolism regulation, and diabetes pathogenesis.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Acta Diabetologica
Acta Diabetologica 医学-内分泌学与代谢
CiteScore
7.30
自引率
2.60%
发文量
180
审稿时长
2 months
期刊介绍: Acta Diabetologica is a journal that publishes reports of experimental and clinical research on diabetes mellitus and related metabolic diseases. Original contributions on biochemical, physiological, pathophysiological and clinical aspects of research on diabetes and metabolic diseases are welcome. Reports are published in the form of original articles, short communications and letters to the editor. Invited reviews and editorials are also published. A Methodology forum, which publishes contributions on methodological aspects of diabetes in vivo and in vitro, is also available. The Editor-in-chief will be pleased to consider articles describing new techniques (e.g., new transplantation methods, metabolic models), of innovative importance in the field of diabetes/metabolism. Finally, workshop reports are also welcome in Acta Diabetologica.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信