Tianshu Zheng , Chuyang Ye , Zhaopeng Cui , Hui Zhang , Daniel C. Alexander , Dan Wu
{"title":"基于扩散核磁共振的显微结构估计的梯度和噪声调谐自适应迭代网络","authors":"Tianshu Zheng , Chuyang Ye , Zhaopeng Cui , Hui Zhang , Daniel C. Alexander , Dan Wu","doi":"10.1016/j.media.2025.103535","DOIUrl":null,"url":null,"abstract":"<div><div>Diffusion MRI (dMRI) is a powerful technique for investigating tissue microstructure properties. However, advanced dMRI models are typically complex and nonlinear, requiring a large number of acquisitions in the <em>q</em>-space. Deep learning techniques, specifically optimization-based networks, have been proposed to improve the model fitting with limited <em>q</em>-space data. Previous optimization procedures relied on the empirical selection of iteration block numbers and the network structures were based on the <em>iterative hard thresholding</em> (IHT) algorithm, which may suffer from instability during sparse reconstruction. In this study, we introduced an <em>extragradient and noise-tuning adaptive iterative network</em>, a generic network for estimating dMRI model parameters. We proposed an adaptive mechanism that flexibly adjusts the sparse representation process, depending on specific dMRI models, datasets, and downsampling strategies, avoiding manual selection and accelerating inference. In addition, we proposed a noise-tuning module to assist the network in escaping from local minimum/saddle points. The network also included an additional projection of the extragradient to ensure its convergence. We evaluated the performance of the proposed network on the <em>neurite orientation dispersion and density imaging</em> (NODDI) model and <em>diffusion basis spectrum imaging</em> (DBSI) model on two 3T <em>Human Connectome Project</em> (HCP) datasets and a 7T HCP dataset with six different downsampling strategies. The proposed framework demonstrated superior accuracy and generalizability compared to other state-of-the-art microstructural estimation algorithms.</div></div>","PeriodicalId":18328,"journal":{"name":"Medical image analysis","volume":"102 ","pages":"Article 103535"},"PeriodicalIF":10.7000,"publicationDate":"2025-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"An extragradient and noise-tuning adaptive iterative network for diffusion MRI-based microstructural estimation\",\"authors\":\"Tianshu Zheng , Chuyang Ye , Zhaopeng Cui , Hui Zhang , Daniel C. Alexander , Dan Wu\",\"doi\":\"10.1016/j.media.2025.103535\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Diffusion MRI (dMRI) is a powerful technique for investigating tissue microstructure properties. However, advanced dMRI models are typically complex and nonlinear, requiring a large number of acquisitions in the <em>q</em>-space. Deep learning techniques, specifically optimization-based networks, have been proposed to improve the model fitting with limited <em>q</em>-space data. Previous optimization procedures relied on the empirical selection of iteration block numbers and the network structures were based on the <em>iterative hard thresholding</em> (IHT) algorithm, which may suffer from instability during sparse reconstruction. In this study, we introduced an <em>extragradient and noise-tuning adaptive iterative network</em>, a generic network for estimating dMRI model parameters. We proposed an adaptive mechanism that flexibly adjusts the sparse representation process, depending on specific dMRI models, datasets, and downsampling strategies, avoiding manual selection and accelerating inference. In addition, we proposed a noise-tuning module to assist the network in escaping from local minimum/saddle points. The network also included an additional projection of the extragradient to ensure its convergence. We evaluated the performance of the proposed network on the <em>neurite orientation dispersion and density imaging</em> (NODDI) model and <em>diffusion basis spectrum imaging</em> (DBSI) model on two 3T <em>Human Connectome Project</em> (HCP) datasets and a 7T HCP dataset with six different downsampling strategies. The proposed framework demonstrated superior accuracy and generalizability compared to other state-of-the-art microstructural estimation algorithms.</div></div>\",\"PeriodicalId\":18328,\"journal\":{\"name\":\"Medical image analysis\",\"volume\":\"102 \",\"pages\":\"Article 103535\"},\"PeriodicalIF\":10.7000,\"publicationDate\":\"2025-03-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Medical image analysis\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1361841525000829\",\"RegionNum\":1,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical image analysis","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1361841525000829","RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
An extragradient and noise-tuning adaptive iterative network for diffusion MRI-based microstructural estimation
Diffusion MRI (dMRI) is a powerful technique for investigating tissue microstructure properties. However, advanced dMRI models are typically complex and nonlinear, requiring a large number of acquisitions in the q-space. Deep learning techniques, specifically optimization-based networks, have been proposed to improve the model fitting with limited q-space data. Previous optimization procedures relied on the empirical selection of iteration block numbers and the network structures were based on the iterative hard thresholding (IHT) algorithm, which may suffer from instability during sparse reconstruction. In this study, we introduced an extragradient and noise-tuning adaptive iterative network, a generic network for estimating dMRI model parameters. We proposed an adaptive mechanism that flexibly adjusts the sparse representation process, depending on specific dMRI models, datasets, and downsampling strategies, avoiding manual selection and accelerating inference. In addition, we proposed a noise-tuning module to assist the network in escaping from local minimum/saddle points. The network also included an additional projection of the extragradient to ensure its convergence. We evaluated the performance of the proposed network on the neurite orientation dispersion and density imaging (NODDI) model and diffusion basis spectrum imaging (DBSI) model on two 3T Human Connectome Project (HCP) datasets and a 7T HCP dataset with six different downsampling strategies. The proposed framework demonstrated superior accuracy and generalizability compared to other state-of-the-art microstructural estimation algorithms.
期刊介绍:
Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.