Yan Yang, Xiaoxing You, Ke Zhang, Zhenqi Fu, Xianyun Wang, Jiajun Ding, Jiamei Sun, Zhou Yu, Qingming Huang, Weidong Han, Jun Yu
{"title":"胸部x光报告生成的时空和检索增强模型。","authors":"Yan Yang, Xiaoxing You, Ke Zhang, Zhenqi Fu, Xianyun Wang, Jiajun Ding, Jiamei Sun, Zhou Yu, Qingming Huang, Weidong Han, Jun Yu","doi":"10.1109/TMI.2025.3554498","DOIUrl":null,"url":null,"abstract":"<p><p>Chest X-ray report generation has attracted increasing research attention. However, most existing methods neglect the temporal information and typically generate reports conditioned on a fixed number of images. In this paper, we propose STREAM: Spatio-Temporal and REtrieval-Augmented Modelling for automatic chest X-ray report generation. It mimics clinical diagnosis by integrating current and historical studies to interpret the present condition (temporal), with each study containing images from multi-views (spatial). Concretely, our STREAM is built upon an encoder-decoder architecture, utilizing a large language model (LLM) as the decoder. Overall, spatio-temporal visual dynamics are packed as visual prompts and regional semantic entities are retrieved as textual prompts. First, a token packer is proposed to capture condensed spatio-temporal visual dynamics, enabling the flexible fusion of images from current and historical studies. Second, to augment the generation with existing knowledge and regional details, a progressive semantic retriever is proposed to retrieve semantic entities from a preconstructed knowledge bank as heuristic text prompts. The knowledge bank is constructed to encapsulate anatomical chest X-ray knowledge into structured entities, each linked to a specific chest region. Extensive experiments on public datasets have shown the state-of-the-art performance of our method. Related codes and the knowledge bank are available at https://github.com/yangyan22/STREAM.</p>","PeriodicalId":94033,"journal":{"name":"IEEE transactions on medical imaging","volume":"PP ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Spatio-Temporal and Retrieval-Augmented Modelling for Chest X-Ray Report Generation.\",\"authors\":\"Yan Yang, Xiaoxing You, Ke Zhang, Zhenqi Fu, Xianyun Wang, Jiajun Ding, Jiamei Sun, Zhou Yu, Qingming Huang, Weidong Han, Jun Yu\",\"doi\":\"10.1109/TMI.2025.3554498\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Chest X-ray report generation has attracted increasing research attention. However, most existing methods neglect the temporal information and typically generate reports conditioned on a fixed number of images. In this paper, we propose STREAM: Spatio-Temporal and REtrieval-Augmented Modelling for automatic chest X-ray report generation. It mimics clinical diagnosis by integrating current and historical studies to interpret the present condition (temporal), with each study containing images from multi-views (spatial). Concretely, our STREAM is built upon an encoder-decoder architecture, utilizing a large language model (LLM) as the decoder. Overall, spatio-temporal visual dynamics are packed as visual prompts and regional semantic entities are retrieved as textual prompts. First, a token packer is proposed to capture condensed spatio-temporal visual dynamics, enabling the flexible fusion of images from current and historical studies. Second, to augment the generation with existing knowledge and regional details, a progressive semantic retriever is proposed to retrieve semantic entities from a preconstructed knowledge bank as heuristic text prompts. The knowledge bank is constructed to encapsulate anatomical chest X-ray knowledge into structured entities, each linked to a specific chest region. Extensive experiments on public datasets have shown the state-of-the-art performance of our method. Related codes and the knowledge bank are available at https://github.com/yangyan22/STREAM.</p>\",\"PeriodicalId\":94033,\"journal\":{\"name\":\"IEEE transactions on medical imaging\",\"volume\":\"PP \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-03-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"IEEE transactions on medical imaging\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/TMI.2025.3554498\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE transactions on medical imaging","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/TMI.2025.3554498","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Spatio-Temporal and Retrieval-Augmented Modelling for Chest X-Ray Report Generation.
Chest X-ray report generation has attracted increasing research attention. However, most existing methods neglect the temporal information and typically generate reports conditioned on a fixed number of images. In this paper, we propose STREAM: Spatio-Temporal and REtrieval-Augmented Modelling for automatic chest X-ray report generation. It mimics clinical diagnosis by integrating current and historical studies to interpret the present condition (temporal), with each study containing images from multi-views (spatial). Concretely, our STREAM is built upon an encoder-decoder architecture, utilizing a large language model (LLM) as the decoder. Overall, spatio-temporal visual dynamics are packed as visual prompts and regional semantic entities are retrieved as textual prompts. First, a token packer is proposed to capture condensed spatio-temporal visual dynamics, enabling the flexible fusion of images from current and historical studies. Second, to augment the generation with existing knowledge and regional details, a progressive semantic retriever is proposed to retrieve semantic entities from a preconstructed knowledge bank as heuristic text prompts. The knowledge bank is constructed to encapsulate anatomical chest X-ray knowledge into structured entities, each linked to a specific chest region. Extensive experiments on public datasets have shown the state-of-the-art performance of our method. Related codes and the knowledge bank are available at https://github.com/yangyan22/STREAM.