Guizhi Liu, Na Tian, Lan Chen, Siyi Xie, Jinyu Hu, Qifang Jin, Chenyu Shao, Mengdi Huang, Qin Su, Jianan Huang, Zhonghua Liu, Shuoqian Liu
{"title":"茶树表没食子儿茶素-3-没食子酸酯对农杆菌介导转化效率负面影响的转录组学分析","authors":"Guizhi Liu, Na Tian, Lan Chen, Siyi Xie, Jinyu Hu, Qifang Jin, Chenyu Shao, Mengdi Huang, Qin Su, Jianan Huang, Zhonghua Liu, Shuoqian Liu","doi":"10.3390/cimb47030178","DOIUrl":null,"url":null,"abstract":"<p><p><i>Agrobacterium</i>-mediated transformation is a widely used method for plant genetic modification. However, its efficiency in tea plants is notably low, and the underlying molecular mechanisms remain unclear, hindering advancements in the molecular breeding and biology of tea plants. In this study, tobacco was utilized as a model to investigate the effects of various concentrations of epigallocatechin-3-gallate (EGCG) on <i>Agrobacterium</i> transformation efficiency. The results demonstrated that at an EGCG concentration of 0.4 mg/mL, <i>Agrobacterium</i> nearly lost its ability to transform tobacco. Additionally, malondialdehyde content in <i>Agrobacterium</i> was measured before and after EGCG treatment. The findings indicated that EGCG treatment led to an increase in malondialdehyde content. Transcriptome sequencing analysis revealed that differentially expressed genes (DEGs) involved in <i>Agrobacterium</i> flagellar synthesis and secretion systems were down-regulated under EGCG stress. Furthermore, <i>flgE</i>, <i>virB4</i>, and <i>virB6</i> were identified as hub genes through weighted gene co-expression network analysis (WGCNA). These results elucidate the dynamic mechanisms by which EGCG affects <i>Agrobacterium</i> at both the physicochemical and molecular levels, providing a theoretical basis for optimizing genetic transformation in tea plants.</p>","PeriodicalId":10839,"journal":{"name":"Current Issues in Molecular Biology","volume":"47 3","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2025-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11941606/pdf/","citationCount":"0","resultStr":"{\"title\":\"Transcriptomic Analysis of the Negative Effect of Epigallocatechin-3-Gallate from Tea Plant (<i>Camellia sinensis</i>) on <i>Agrobacterium</i>-Mediated Transformation Efficiency.\",\"authors\":\"Guizhi Liu, Na Tian, Lan Chen, Siyi Xie, Jinyu Hu, Qifang Jin, Chenyu Shao, Mengdi Huang, Qin Su, Jianan Huang, Zhonghua Liu, Shuoqian Liu\",\"doi\":\"10.3390/cimb47030178\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Agrobacterium</i>-mediated transformation is a widely used method for plant genetic modification. However, its efficiency in tea plants is notably low, and the underlying molecular mechanisms remain unclear, hindering advancements in the molecular breeding and biology of tea plants. In this study, tobacco was utilized as a model to investigate the effects of various concentrations of epigallocatechin-3-gallate (EGCG) on <i>Agrobacterium</i> transformation efficiency. The results demonstrated that at an EGCG concentration of 0.4 mg/mL, <i>Agrobacterium</i> nearly lost its ability to transform tobacco. Additionally, malondialdehyde content in <i>Agrobacterium</i> was measured before and after EGCG treatment. The findings indicated that EGCG treatment led to an increase in malondialdehyde content. Transcriptome sequencing analysis revealed that differentially expressed genes (DEGs) involved in <i>Agrobacterium</i> flagellar synthesis and secretion systems were down-regulated under EGCG stress. Furthermore, <i>flgE</i>, <i>virB4</i>, and <i>virB6</i> were identified as hub genes through weighted gene co-expression network analysis (WGCNA). These results elucidate the dynamic mechanisms by which EGCG affects <i>Agrobacterium</i> at both the physicochemical and molecular levels, providing a theoretical basis for optimizing genetic transformation in tea plants.</p>\",\"PeriodicalId\":10839,\"journal\":{\"name\":\"Current Issues in Molecular Biology\",\"volume\":\"47 3\",\"pages\":\"\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-03-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11941606/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Issues in Molecular Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3390/cimb47030178\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Issues in Molecular Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3390/cimb47030178","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Transcriptomic Analysis of the Negative Effect of Epigallocatechin-3-Gallate from Tea Plant (Camellia sinensis) on Agrobacterium-Mediated Transformation Efficiency.
Agrobacterium-mediated transformation is a widely used method for plant genetic modification. However, its efficiency in tea plants is notably low, and the underlying molecular mechanisms remain unclear, hindering advancements in the molecular breeding and biology of tea plants. In this study, tobacco was utilized as a model to investigate the effects of various concentrations of epigallocatechin-3-gallate (EGCG) on Agrobacterium transformation efficiency. The results demonstrated that at an EGCG concentration of 0.4 mg/mL, Agrobacterium nearly lost its ability to transform tobacco. Additionally, malondialdehyde content in Agrobacterium was measured before and after EGCG treatment. The findings indicated that EGCG treatment led to an increase in malondialdehyde content. Transcriptome sequencing analysis revealed that differentially expressed genes (DEGs) involved in Agrobacterium flagellar synthesis and secretion systems were down-regulated under EGCG stress. Furthermore, flgE, virB4, and virB6 were identified as hub genes through weighted gene co-expression network analysis (WGCNA). These results elucidate the dynamic mechanisms by which EGCG affects Agrobacterium at both the physicochemical and molecular levels, providing a theoretical basis for optimizing genetic transformation in tea plants.
期刊介绍:
Current Issues in Molecular Biology (CIMB) is a peer-reviewed journal publishing review articles and minireviews in all areas of molecular biology and microbiology. Submitted articles are subject to an Article Processing Charge (APC) and are open access immediately upon publication. All manuscripts undergo a peer-review process.