基于网络树合并的三维脑肿瘤分割

IF 6.3 2区 医学 Q1 BIOLOGY
Lingling Fang , Yongcheng Yu , Shihao Zhang , Yanchao Zhang
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引用次数: 0

摘要

脑肿瘤是人体中最具破坏性的疾病之一,其生长可能导致脑组织功能受损,甚至危及生命,严重影响患者的身心健康。目前,三维(3D)脑肿瘤的分割方法可以更好地反映整个脑组织的位置和关系,提供更多的参考信息。然而,现有的3D分割技术仍然存在挑战,包括缺乏对3D图像的直接操作以及临床数据集的次优性能。针对这一问题,本文提出了一种基于网络树合并的三维脑肿瘤分割方法。该方法利用机体靶点之间的拓扑确定建立关系,基于病理拓扑构建网状结构,然后根据拓扑块的结构和强度合并拓扑块,从而分割出3D MRI脑肿瘤图像的总肿瘤体积(Gross Tumor Volume, GTV)。使用Dice、HD95、Precision和Recall对该方法进行了验证,这些指标在临床数据集上的值约为0.824、10.981、0.829、0.834,而在BraTS数据集上的值接近0.873、4.902、0.871、0.864。在公共和临床数据集上的实验验证证实了所提出方法的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
3D brain tumor segmentation based on a novel nettree merging
Brain tumors rank among the most devastating diseases in the human body, with their growth potentially resulting in impaired brain tissue function and even life-threatening scenarios, profoundly impacting patients physical and mental well-being. Presently, segmentation methods for three-dimensional (3D) brain tumors can better reflect the position and relationship of the entire brain tissue, providing more reference information. However, challenges persist with existing 3D segmentation techniques, including the lack of direct manipulation on 3D images and suboptimal performance on clinical datasets. Addressing this, this paper proposes a 3D brain tumor segmentation method based on nettree merging. This approach leverages a topological determination between body targets to establish relationships, constructs a nettree structure based on pathological topology, and subsequently merges topological block according to its structure and intensity, thereby segmenting the Gross Tumor Volume (GTV) of 3D MRI brain tumor images. The proposed method is validated using Dice, HD95, Precision, and Recall, and the values of these metrics on the clinical dataset are approximately 0.824, 10.981, 0.829, 0.834, while on the BraTS dataset, they are close to 0.873, 4.902, 0.871, 0.864. Experimental validation on both public and clinical datasets substantiates the effectiveness of the proposed method.
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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