对金湖石斑鱼(Epinephelus fuscoguttatus♀× Epinephelus tukula♂)肝脏和脾脏的转录组研究揭示了其对鳗弧菌感染的应答机制

IF 2.2 2区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Huimin Duan , Yongsheng Tian , Zhentong Li
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引用次数: 0

摘要

鳗弧菌在水产养殖中是一种致病生物,可导致水生物种发生致命的溶血性败血症。但目前对金湖石斑鱼受鳗弧菌感染的分子机制研究较少。本研究对金湖石斑鱼感染鳗鲡弧菌后的肝脏和脾脏组织进行了转录组分析。我们在肝脏组和脾脏组分别鉴定出2978个和2506个deg,其中上调基因分别为1689和1502个,下调基因分别为1289和1004个。基因集富集分析显示,与肝脏中碳代谢和糖酵解/糖异生等代谢相关的基因显著减少,而与上述途径以及脾脏中柠檬酸循环相关的基因上调。此外,肝脏和脾脏的上调基因都在细胞周期中富集。随后对TLR通路中涉及的主要deg的研究表明,弓形虫感染可能通过tlr5的过表达激活TLR通路,促进促炎细胞因子il- 1β和il-8的合成。从中筛选出11个与代谢、细胞周期和免疫相关的基因并进行了鉴定。综上所述,我们的研究表明,在影响金湖石斑鱼代谢和细胞周期的同时,anguillarum也会引发免疫防御反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Transcriptome research conducted on the liver and spleen of Jinhu grouper (Epinephelus fuscoguttatus♀ × Epinephelus tukula♂) reveals the mechanism in response to Vibrio anguillarum infection

Transcriptome research conducted on the liver and spleen of Jinhu grouper (Epinephelus fuscoguttatus♀ × Epinephelus tukula♂) reveals the mechanism in response to Vibrio anguillarum infection
Vibrio anguillarum serves as a pathogenic organism in aquaculture, leading to a lethal hemolytic septicemia in aquatic species. Whereas little study has evaluated the molecular mechanism of the infection caused by V. anguillarum in Jinhu grouper. In this study, analysis of the transcriptome was conducted on the liver and spleen tissues from Jinhu groupers infected with V. anguillarum infection. We identified 2978 DEGs in the liver group and 2506 DEGs in spleen group, including 1689 and 1502 up-regulated genes and 1289 and 1004 down-regulated genes, respectively. Gene set enrichment analysis revealed a significant reduction in genes associated with metabolism such as carbon metabolism and glycolysis/gluconeogenesis in the liver, while upregulation of genes linked to the above pathways as well as in the citrate cycle in the spleen. In addition, the upregulated genes in the liver and spleen are both enriched in the cell cycle. Subsequent investigation into the principal DEGs implicated in the TLR pathways showed that V. anguillarum infection may activate the TLR pathway by overexpression of the tlr5 and promote the synthesis of proinflammatory cytokines il1β and il-8. Among these, 11 genes related to metabolism, cell cycle and immunity were selected and characterized. Overall, our research indicates that V. anguillarum can affect the metabolism and cell cycle while also triggering immune defense reactions in Jinhu grouper.
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来源期刊
CiteScore
5.10
自引率
3.30%
发文量
69
审稿时长
33 days
期刊介绍: Comparative Biochemistry & Physiology (CBP) publishes papers in comparative, environmental and evolutionary physiology. Part D: Genomics and Proteomics (CBPD), focuses on “omics” approaches to physiology, including comparative and functional genomics, metagenomics, transcriptomics, proteomics, metabolomics, and lipidomics. Most studies employ “omics” and/or system biology to test specific hypotheses about molecular and biochemical mechanisms underlying physiological responses to the environment. We encourage papers that address fundamental questions in comparative physiology and biochemistry rather than studies with a focus that is purely technical, methodological or descriptive in nature.
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