新型氟胞嘧啶盐:结构,hirshfield表面分析,形态学,FIMs和计算研究。

IF 2.7 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Hela Ferjani
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引用次数: 0

摘要

5-氟胞嘧啶(FC)具有先进的固态结构,这对其药物开发提出了挑战。本文介绍了一种新型药用盐——氟胞嘧啶(HFC+. cl -)的实验和理论研究。单晶x射线衍射(SCXRD)研究表明HFC+。Cl-在单斜晶系和P21/c空间群中形成晶体。该结构由一系列氢键相互作用维持,包括N-H··Cl、N-H··O和C-H··F。此外,氯离子与HFC+阳离子之间的非共价阴离子···π相互作用对建立三维网络起作用。利用Hirshfeld表面分析(HS)和二维指纹图谱分析了晶体内部的分子间相互作用。结果表明,H··Cl/Cl··H、O··H/H··O、F··H/H·F的相互作用最为显著。全相互作用图(FIMs)分析预测了氢键受体和给体的位置,证实了在HFC+. cl -中观察到的超分子排列。使用Bravais-Friedel, donay - harker (BFDH)和Growth Morphology (GM)方法的计算建模研究预测了HFC+的形态。Cl -晶体。两种方法都估计出具有六个主要方面特征的类似晶体形状。利用DMol3软件进行密度泛函理论(DFT)计算,研究了HFC+. cl -的电子结构和综合反应性特征。低HOMO能表明对亲电攻击具有显著的稳定性,而高HOMO- lumo带隙表明高化学硬度。还计算了福井函数,以确定易受亲核和亲电攻击的原子位置。该研究对HFC+的结构和电子特性提供了全面的见解。Cl-,为开发新的药物组合物提供了有价值的信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Novel flucytosine salt: Structure, Hirshfild surface analysis, morphology, FIMs, and computational studies

Novel flucytosine salt: Structure, Hirshfild surface analysis, morphology, FIMs, and computational studies
5-Flucytosine (FC) exhibits an advanced solid-state structure, which presents challenges for its pharmaceutical development. This paper presents experimental, and theoretical studies of a novel pharmaceutical salt, fluorocytosinium chloride, HFC+.Cl. Single crystal X-ray diffraction (SCXRD) investigation indicates that HFC+.Cl forms crystals in the monoclinic system and P21/c space group. The structure is maintained by a series of hydrogen bonding interactions, comprising N-H···Cl, N-H···O, and C-H···F. In addition, noncovalent anion···π interactions between chloride anions and HFC+ cations play a role in establishing a three-dimensional network. Hirshfeld surface analysis (HS) and two-dimensional fingerprinting were used to enumerate the intermolecular interactions within the crystal. The results demonstrate that the H···Cl/Cl···H, O···H/H···O, and F···H/H···F interactions are the most significant. Full Interaction Maps (FIMs) analysis predicts the positions of hydrogen bond acceptors and donors, confirming the supramolecular arrangement observed in HFC+.Cl. Computational modeling studies using the Bravais-Friedel, Donnay-Harker (BFDH), and Growth Morphology (GM) methods predict the morphology of the HFC+.Cl crystal. Both approaches estimate a comparable crystal shape characterized by six principal facets. Density functional theory (DFT) calculations were conducted utilizing the DMol3 software to investigate the electronic structure and comprehensive reactivity features of HFC+.Cl. The low HOMO energy suggests significant stability against electrophilic attacks, while the high HOMO-LUMO band gap indicates high chemical hardness. Fukui functions were also calculated to identify atomic sites susceptible to nucleophilic and electrophilic attacks. This study offers a comprehensive insight into the structural and electronic properties of HFC+.Cl, offering valuable information for the development of new pharmaceutical compositions.
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来源期刊
Journal of molecular graphics & modelling
Journal of molecular graphics & modelling 生物-计算机:跨学科应用
CiteScore
5.50
自引率
6.90%
发文量
216
审稿时长
35 days
期刊介绍: The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design. As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.
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