肿瘤组织分类的重构:基于多实例学习的全幻灯片图像分类多尺度框架。

IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Zixuan Wu, Haiyong He, Xiushun Zhao, Zhenghui Lin, Yanyan Ye, Jing Guo, Wanming Hu, Xiaobing Jiang
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引用次数: 0

摘要

在癌症病理诊断中,分析全幻灯片图像(WSI)面临着诸如无效数据、不同放大倍数下不同组织特征和大量硬样本等挑战。在基于wsi的病理诊断中,多实例学习(MIL)是解决弱监督分类的有力工具。然而,现有的MIL框架无法同时解决这些问题。为了解决这些挑战,我们提出了一个由三个互补部分组成的集成识别框架:预处理选择方法,用于多实例学习的高效特征金字塔网络(EFPN)模型和相似焦点损失。预处理选择方法准确识别和选择具有代表性的图像斑块,有效减少无效数据干扰,提高后续模型训练效率。EFPN模型受病理学家诊断过程的启发,通过构建多尺度特征金字塔来捕捉WSI图像中的不同组织特征,增强了模型对肿瘤组织特征的识别能力。此外,Similarity Focal Loss通过关注硬样本和强调分类边界信息,进一步提高了模型的判别能力和泛化性能。CAMELYON16和两个私有数据集的肿瘤二元分类测试准确率分别达到93.58%、84.74%和99.91%,均优于现有技术。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Reimagining cancer tissue classification: a multi-scale framework based on multi-instance learning for whole slide image classification.

In cancer pathology diagnosis, analyzing Whole Slide Images (WSI) encounters challenges like invalid data, varying tissue features at different magnifications, and numerous hard samples. Multiple Instance Learning (MIL) is a powerful tool for addressing weakly supervised classification in WSI-based pathology diagnosis. However, existing MIL frameworks cannot simultaneously tackle these issues. To address these challenges, we propose an integrated recognition framework comprising three complementary components: a preprocessing selection method, an Efficient Feature Pyramid Network (EFPN) model for multi-instance learning, and a Similarity Focal Loss. The preprocessing selection method accurately identifies and selects representative image patches, effectively reducing invalid data interference and enhancing subsequent model training efficiency. The EFPN model, inspired by pathologists' diagnostic processes, captures different tissue features in WSI images by constructing a multi-scale feature pyramid, enhancing the model's ability to recognize tumor tissue features. Additionally, the Similarity Focal Loss further improves the model's discriminative power and generalization performance by focusing on hard samples and emphasizing classification boundary information. The test accuracy for binary tumor classification on the CAMELYON16 and two private datasets reached 93.58%, 84.74%, and 99.91%, respectively, all of which outperform existing techniques.

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来源期刊
Medical & Biological Engineering & Computing
Medical & Biological Engineering & Computing 医学-工程:生物医学
CiteScore
6.00
自引率
3.10%
发文量
249
审稿时长
3.5 months
期刊介绍: Founded in 1963, Medical & Biological Engineering & Computing (MBEC) continues to serve the biomedical engineering community, covering the entire spectrum of biomedical and clinical engineering. The journal presents exciting and vital experimental and theoretical developments in biomedical science and technology, and reports on advances in computer-based methodologies in these multidisciplinary subjects. The journal also incorporates new and evolving technologies including cellular engineering and molecular imaging. MBEC publishes original research articles as well as reviews and technical notes. Its Rapid Communications category focuses on material of immediate value to the readership, while the Controversies section provides a forum to exchange views on selected issues, stimulating a vigorous and informed debate in this exciting and high profile field. MBEC is an official journal of the International Federation of Medical and Biological Engineering (IFMBE).
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