Fatima Outahar, Mohamed Moumou, El Mostapha Rakib, Mohamed Akssira, Mohamed Saadi, Lahcen El Ammari, Sofia Zazouli, El Mostafa Ketatni
{"title":"13-(哌啶基)偏苯并烷-9-酮的合成、X射线衍射结构、光谱学、希尔施菲尔德表面分析以及计算和硅学 ADME 研究","authors":"Fatima Outahar, Mohamed Moumou, El Mostapha Rakib, Mohamed Akssira, Mohamed Saadi, Lahcen El Ammari, Sofia Zazouli, El Mostafa Ketatni","doi":"10.1007/s11224-024-02387-1","DOIUrl":null,"url":null,"abstract":"<div><p>In this work, 13-(piperidinyl)parthenolid-9-one has been synthesized, elucidated by <sup>1</sup>H- and <sup>13</sup>C-NMR spectral data, and confirmed by X-ray diffraction. In the crystal structure, the ten-membered ring displays an approximate chair-chair conformation, whereas the five-membered furan ring has an envelope conformation. The furan ring is linked to a 1-ethylpiperidine in which the piperidine cycle adopts a perfect chair conformation. The mean plane of the furane ring is nearly perpendicular to that of the piperidine cycle as indicated by the dihedral angle between them of 83.0 (3)°. Two hydrogen bonds connect the molecules and ensure crystal cohesion. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions are H⋯H and O⋯H/H⋯O interactions. The molecular geometry in the ground state was calculated by using the HF and DFT methods with 6-31G(d,p) and 6-311G(d,p) basis sets and compared with the experimental data. Besides, molecular electrostatic potential (MEP), Mulliken atomic charges and natural bond charges were computationally determined with the same basis sets. The thermodynamic properties have been obtained from the theoretical vibrations. Finally, computational ADME studies of the title compound were performed and found to have good oral bioavailability.</p></div>","PeriodicalId":780,"journal":{"name":"Structural Chemistry","volume":"36 2","pages":"513 - 525"},"PeriodicalIF":2.1000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Synthesis, XRD structure, spectroscopy, hirshfeld surface analysis, and computational and in silico ADME studies of 13-(piperidinyl)parthenolid-9-one\",\"authors\":\"Fatima Outahar, Mohamed Moumou, El Mostapha Rakib, Mohamed Akssira, Mohamed Saadi, Lahcen El Ammari, Sofia Zazouli, El Mostafa Ketatni\",\"doi\":\"10.1007/s11224-024-02387-1\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>In this work, 13-(piperidinyl)parthenolid-9-one has been synthesized, elucidated by <sup>1</sup>H- and <sup>13</sup>C-NMR spectral data, and confirmed by X-ray diffraction. In the crystal structure, the ten-membered ring displays an approximate chair-chair conformation, whereas the five-membered furan ring has an envelope conformation. The furan ring is linked to a 1-ethylpiperidine in which the piperidine cycle adopts a perfect chair conformation. The mean plane of the furane ring is nearly perpendicular to that of the piperidine cycle as indicated by the dihedral angle between them of 83.0 (3)°. Two hydrogen bonds connect the molecules and ensure crystal cohesion. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions are H⋯H and O⋯H/H⋯O interactions. The molecular geometry in the ground state was calculated by using the HF and DFT methods with 6-31G(d,p) and 6-311G(d,p) basis sets and compared with the experimental data. Besides, molecular electrostatic potential (MEP), Mulliken atomic charges and natural bond charges were computationally determined with the same basis sets. The thermodynamic properties have been obtained from the theoretical vibrations. Finally, computational ADME studies of the title compound were performed and found to have good oral bioavailability.</p></div>\",\"PeriodicalId\":780,\"journal\":{\"name\":\"Structural Chemistry\",\"volume\":\"36 2\",\"pages\":\"513 - 525\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2024-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Structural Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s11224-024-02387-1\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Structural Chemistry","FirstCategoryId":"92","ListUrlMain":"https://link.springer.com/article/10.1007/s11224-024-02387-1","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Synthesis, XRD structure, spectroscopy, hirshfeld surface analysis, and computational and in silico ADME studies of 13-(piperidinyl)parthenolid-9-one
In this work, 13-(piperidinyl)parthenolid-9-one has been synthesized, elucidated by 1H- and 13C-NMR spectral data, and confirmed by X-ray diffraction. In the crystal structure, the ten-membered ring displays an approximate chair-chair conformation, whereas the five-membered furan ring has an envelope conformation. The furan ring is linked to a 1-ethylpiperidine in which the piperidine cycle adopts a perfect chair conformation. The mean plane of the furane ring is nearly perpendicular to that of the piperidine cycle as indicated by the dihedral angle between them of 83.0 (3)°. Two hydrogen bonds connect the molecules and ensure crystal cohesion. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions are H⋯H and O⋯H/H⋯O interactions. The molecular geometry in the ground state was calculated by using the HF and DFT methods with 6-31G(d,p) and 6-311G(d,p) basis sets and compared with the experimental data. Besides, molecular electrostatic potential (MEP), Mulliken atomic charges and natural bond charges were computationally determined with the same basis sets. The thermodynamic properties have been obtained from the theoretical vibrations. Finally, computational ADME studies of the title compound were performed and found to have good oral bioavailability.
期刊介绍:
Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry.
We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.