通过多重高分辨率熔化曲线分析和生化表征改进G6PD缺乏症的合子检测基因筛选。

IF 2.6 4区 医学 Q2 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
Usa Boonyuen, Beatriz Aira C Jacob, Kamonwan Chamchoy, Natnicha Pengsuk, Sirinyatorn Talukam, Chanya Petcharat, Emily R Adams, Thomas Edwards, Kobporn Boonnak, Syazwani Itri Amran, Nurriza Ab Latif, Naveen Eugene Louis
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引用次数: 0

摘要

准确诊断葡萄糖-6-磷酸脱氢酶(G6PD)缺乏症对于使用8-氨基喹啉类药物(伯氨喹和他非诺喹)治疗疟疾复发至关重要,后者可在G6PD缺乏症患者中引发溶血性贫血。这在G6PD缺乏率超过3%-5%的地区尤其重要,包括东南亚和泰国。虽然定量表型测试可以识别可能有风险的中间活性妇女,但它们不能明确识别需要适当咨询的杂合女性。本研究旨在利用高分辨率熔化曲线分析建立G6PD缺乏症基因检测方法,对15个G6PD等位基因进行合子性鉴定。在泰国4个地点采集的557份样本中,基于间接酶测定的G6PD缺乏症患病率为6.10%,其中8.08%为中度缺乏症。与Sanger测序相比,所开发的高分辨率熔融测定法表现出优异的性能,在检测G6PD等位基因方面达到100%的灵敏度和特异性。在四个地理位置观察到基因型差异,其中C . 1311c >T和C .1365- 13t >C的组合是最常见的基因型。复合突变,以G6PD Viangchan (C . 871g >A, C . 1311c >T和C .1365- 13t >C)为主,占检测突变的15.26%。高分辨率熔融分析还鉴定出双突变G6PD Chinese-4 + Canton和G6PD Radlowo,这是在泰国首次发现的变异。生化和结构表征表明,这些变异通过破坏蛋白质结构的稳定性显著降低了催化活性,特别是在Radlowo突变的情况下。这些高分辨率熔解分析的改进提供了一个高度准确和高通量的平台,可以通过实现精确诊断,支持遗传咨询和指导公共卫生工作来管理G6PD缺乏症,从而改善患者护理-特别是在疟疾流行地区,8-氨基喹啉疗法对缺乏症患者构成风险。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Improved genetic screening with zygosity detection through multiplex high-resolution melting curve analysis and biochemical characterisation for G6PD deficiency.

Accurate diagnosis of glucose-6-phosphate dehydrogenase (G6PD) deficiency is crucial for relapse malaria treatment using 8-aminoquinolines (primaquine and tafenoquine), which can trigger haemolytic anaemia in G6PD-deficient individuals. This is particularly important in regions where the prevalence of G6PD deficiency exceeds 3%-5%, including Southeast Asia and Thailand. While quantitative phenotypic tests can identify women with intermediate activity who may be at risk, they cannot unambiguously identify heterozygous females who require appropriate counselling. This study aimed to develop a genetic test for G6PD deficiency using high-resolution melting curve analysis, which enables zygosity identification of 15 G6PD alleles. In 557 samples collected from four locations in Thailand, the prevalence of G6PD deficiency based on indirect enzyme assay was 6.10%, with 8.08% exhibiting intermediate deficiency. The developed high-resolution melting assays demonstrated excellent performance, achieving 100% sensitivity and specificity in detecting G6PD alleles compared with Sanger sequencing. Genotypic variations were observed across four geographic locations, with the combination of c.1311C>T and c.1365-13T>C being the most common genotype. Compound mutations, notably G6PD Viangchan (c.871G>A, c.1311C>T and c.1365-13T>C), accounted for 15.26% of detected mutations. The high-resolution melting assays also identified the double mutation G6PD Chinese-4 + Canton and G6PD Radlowo, a variant found for the first time in Thailand. Biochemical and structural characterisation revealed that these variants significantly reduced catalytic activity by destabilising protein structure, particularly in the case of the Radlowo mutation. The refinement of these high-resolution melting assays presents a highly accurate and high-throughput platform that can improve patient care by enabling precise diagnosis, supporting genetic counselling and guiding public health efforts to manage G6PD deficiency-especially crucial in malaria-endemic regions where 8-aminoquinoline therapies pose a risk to deficient individuals.

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来源期刊
Tropical Medicine & International Health
Tropical Medicine & International Health 医学-公共卫生、环境卫生与职业卫生
CiteScore
4.80
自引率
0.00%
发文量
129
审稿时长
6 months
期刊介绍: Tropical Medicine & International Health is published on behalf of the London School of Hygiene and Tropical Medicine, Swiss Tropical and Public Health Institute, Foundation Tropical Medicine and International Health, Belgian Institute of Tropical Medicine and Bernhard-Nocht-Institute for Tropical Medicine. Tropical Medicine & International Health is the official journal of the Federation of European Societies for Tropical Medicine and International Health (FESTMIH).
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