半自动化生产无细胞生物传感器。

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
ACS Synthetic Biology Pub Date : 2025-03-21 Epub Date: 2025-03-12 DOI:10.1021/acssynbio.4c00703
Dylan M Brown, Daniel A Phillips, David C Garcia, Anibal Arce, Tyler Lucci, John P Davies, Jacob T Mangini, Katherine A Rhea, Casey B Bernhards, John R Biondo, Steven M Blum, Stephanie D Cole, Jennifer A Lee, Marilyn S Lee, Nathan D McDonald, Brenda Wang, Dale L Perdue, Xavier S Bower, Walter Thavarajah, Ashty S Karim, Matthew W Lux, Michael C Jewett, Aleksandr E Miklos, Julius B Lucks
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引用次数: 0

摘要

无细胞合成生物学生物传感器有潜力成为有效的体外诊断技术,用于检测化学化合物,如毒素和人类健康生物标志物。与传统的基于实验室的诊断方法相比,它们有几个优势,包括能够组装、冷冻干燥、分发,然后在需要的时候使用。这使它们成为全球廉价快速化学检测的有吸引力的平台。尽管前景看好,但一个主要的挑战是扩大生物传感器的生产规模,以满足其多种用途的需求。目前,在实验室规模的开发过程中,无细胞生物传感器的组装主要是由操作员手动完成的,这导致了质量控制和性能变化问题。在这里,我们探索使用液体处理机器人来制造无细胞生物传感器反应。我们使用Opentrons OT-2液体处理平台在两种不同的无细胞基因表达测定系统上比较了手动和半自动反应组装方法,这两种系统组成性地产生比色(LacZ)或荧光(GFP)信号。我们通过构建整个384孔板的无氟传感细胞生物传感器来测试设计的方案,并证明它们执行接近预期的检测结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Semiautomated Production of Cell-Free Biosensors.

Cell-free synthetic biology biosensors have potential as effective in vitro diagnostic technologies for the detection of chemical compounds, such as toxins and human health biomarkers. They have several advantages over conventional laboratory-based diagnostic approaches, including the ability to be assembled, freeze-dried, distributed, and then used at the point of need. This makes them an attractive platform for cheap and rapid chemical detection across the globe. Though promising, a major challenge is scaling up biosensor manufacturing to meet the needs of their multiple uses. Currently, cell-free biosensor assembly during lab-scale development is mostly performed manually by the operator, leading to quality control and performance variability issues. Here we explore the use of liquid-handling robotics to manufacture cell-free biosensor reactions. We compare both manual and semiautomated reaction assembly approaches using the Opentrons OT-2 liquid handling platform on two different cell-free gene expression assay systems that constitutively produce colorimetric (LacZ) or fluorescent (GFP) signals. We test the designed protocol by constructing an entire 384-well plate of fluoride-sensing cell-free biosensors and demonstrate that they perform close to expected detection outcomes.

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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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