固体核磁共振方法研究RNA结构和动力学的进展

Jinhan He, Xiaole Liu, Shenlin Wang
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引用次数: 0

摘要

核糖核酸(RNA)的结构和动力学在阐明RNA的功能和促进靶向RNA和RNA-蛋白复合物的药物设计中起着至关重要的作用。然而,利用传统的生物物理技术,如x射线晶体学和溶液核磁共振(NMR)来获得RNA结构,由于RNA固有的灵活性和对降解的易感性,带来了挑战。近年来,固态核磁共振(SSNMR)迅速成为表征RNA结构和动力学的一种有前途的替代技术。SSNMR具有几个明显的优势,包括样品状态的灵活性,捕获固体形式RNA动态特征的能力,以及对各种大小RNA的适应性。近十年来,针对RNA的h检测SSNMR方法得到了发展,这些方法旨在阐明固态RNA拓扑结构和碱基对动力学。它们已被应用于确定人类免疫缺陷病毒(HIV)基因组RNA片段的拓扑结构和核糖开关RNA的碱基对动力学。这些进展扩大了SSNMR技术在RNA研究领域的应用。本文综述了在RNA结构和动力学方面的1h检测ssmr研究的最新进展。我们重点介绍了已建立的1h检测SSNMR方法、样品制备方案和快速数据采集方法的实现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Advances in solid-state NMR methods for studying RNA structures and dynamics

Advances in solid-state NMR methods for studying RNA structures and dynamics
Ribonucleic acid (RNA) structures and dynamics play a crucial role in elucidating RNA functions and facilitating the design of drugs targeting RNA and RNA-protein complexes. However, obtaining RNA structures using conventional biophysical techniques, such as X-ray crystallography and solution nuclear magnetic resonance (NMR), presents challenges due to the inherent flexibility and susceptibility to degradation of RNA. In recent years, solid-state NMR (SSNMR) has rapidly emerged as a promising alternative technique for characterizing RNA structure and dynamics. SSNMR has several distinct advantages, including flexibility in sample states, the ability to capture dynamic features of RNA in solid form, and suitability to character RNAs in various sizes. Recent decade witnessed the growth of 1H-detected SSNMR methods on RNA, which targeted elucidating RNA topology and base pair dynamics in solid state. They have been applied to determine the topology of RNA segment in human immunodeficiency virus (HIV) genome and the base pair dynamics of riboswitch RNA. These advancements have expanded the utility of SSNMR techniques within the RNA research field. This review provides a comprehensive discussion of recent progress in 1H-detected SSNMR investigations into RNA structure and dynamics. We focus on the established 1H-detected SSNMR methods, sample preparation protocols, and the implementation of rapid data acquisition approaches.
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来源期刊
Magnetic Resonance Letters
Magnetic Resonance Letters Analytical Chemistry, Spectroscopy, Radiology and Imaging, Biochemistry, Genetics and Molecular Biology (General)
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