低温电子显微镜揭示了TRiC开环的构象景观及其潜在的逐步机理。

Q3 Biochemistry, Genetics and Molecular Biology
QRB Discovery Pub Date : 2024-12-16 eCollection Date: 2025-01-01 DOI:10.1017/qrd.2024.17
Mingliang Jin, Yunxiang Zang, Huping Wang, Yao Cong
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引用次数: 0

摘要

TRiC/CCT复合体通过atp驱动的构象循环帮助大约10%的细胞质蛋白折叠,在维持蛋白质稳态中起着至关重要的作用。尽管我们了解atp驱动的TRiC环闭合和底物折叠,但TRiC环打开和底物释放的过程和机制仍未被探索。在这项研究中,通过确定在ADP存在下酵母TRiC的低温电镜结构集合,包括三个中间过渡态,我们展示了TRiC开环过程的全面图像。在此过程中,CCT3检测到γ-磷酸盐的损失,并以其根尖突出的动态开始,扩展到连续的CCT6/8/7/5亚基的外倾。随后是CCT2、CCT4,尤其是CCT1亚基的显著运动,导致TRiC环打开。我们还观察到CCT2侧的两个环之间存在不可预见的暂时分离,协调最初锁定的CCT4 n末端的释放,这可能参与环打开过程。总的来说,我们的研究揭示了一个循序渐进的TRiC开环机制,提供了一个全面的TRiC构象景观,并揭示了其在感知核苷酸状态和底物释放方面的亚基特异性。我们的发现加深了我们对TRiC辅助蛋白质折叠的理解,并可能为相关疾病的诊断和治疗提供新的策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The conformational landscape of TRiC ring-opening and its underlying stepwise mechanism revealed by cryo-EM.

The TRiC/CCT complex assists in the folding of approximately 10% of cytosolic proteins through an ATP-driven conformational cycle, playing a crucial role in maintaining protein homeostasis. Despite our understanding of ATP-driven TRiC ring closing and substrate folding, the process and mechanisms underlying TRiC ring-opening and substrate release remain largely unexplored. In this study, by determining an ensemble of cryo-EM structures of yeast TRiC in the presence of ADP, including three intermediate transition states, we present a comprehensive picture of the TRiC ring-opening process. During this process, CCT3 detects the loss of γ-phosphate and initiates with the dynamics of its apical protrusion, and expands to the outward leaning of the consecutive CCT6/8/7/5 subunits. This is followed by significant movements of CCT2, CCT4, and especially CCT1 subunits, resulting in the opening of the TRiC rings. We also observed an unforeseen temporary separation between the two rings in the CCT2 side, coordinating the release of the originally locked CCT4 N-terminus, which potentially participates in the ring-opening process. Collectively, our study reveals a stepwise TRiC ring-opening mechanism, provides a comprehensive view of the TRiC conformational landscape, and sheds lights on its subunit specificity in sensing nucleotide status and substrate release. Our findings deepen our understanding of protein folding assisted by TRiC and may inspire new strategies for the diagnosis and treatment of related diseases.

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来源期刊
QRB Discovery
QRB Discovery Biochemistry, Genetics and Molecular Biology-Biophysics
CiteScore
3.60
自引率
0.00%
发文量
18
审稿时长
12 weeks
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