人类阿尔茨海默病中tau病理传播的双物种图模型的单快照反求解器。

ArXiv Pub Date : 2025-02-24
Zheyu Wen, Ali Ghafouri, George Biros
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引用次数: 0

摘要

我们提出了一种方法,使用两种常微分方程(ODE)模型来表征阿尔茨海默病(AD)中错误折叠的tau(或简单的tau)蛋白扩散,并根据临床数据对其进行校准。未知的模型参数是tau蛋白的初始条件(initial condition, IC)和代表tau蛋白迁移、增殖和清除的三个标量参数。在成像数据的驱动下,通过为集成电路制定具有稀疏正则化的约束优化问题来估计这些参数,并使用基于投影的准牛顿算法求解该优化问题。研究了该方法对不同算法参数的敏感性。我们在合成和临床数据上评估了我们的方法的性能。后者包括来自AD神经影像学倡议(ADNI)数据集的病例:455例认知正常(CN), 212例轻度认知障碍(MCI)和45例AD受试者。我们将该方法的性能与常用的Fisher-Kolmogorov (FK)模型进行了比较,该模型具有固定的内嗅皮质(EC) IC。与AD数据集上的FK模型相比,我们的方法平均提高了25.7%的相对误差。在相同优化方案下,FK模型拟合AD数据的r平方得分为0.664,而FK模型的r平方得分为0.55。此外,对于有纵向数据的病例,我们估计了受试者特定的AD发病时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A single-snapshot inverse solver for two-species graph model of tau pathology spreading in human Alzheimer disease.

We propose a method that uses a two-species ordinary differential equation (ODE) model to characterize misfolded tau (or simply tau) protein spreading in Alzheimer's disease (AD) and calibrates it from clinical data. The unknown model parameters are the initial condition (IC) for tau and three scalar parameters representing the migration, proliferation, and clearance of tau proteins. Driven by imaging data, these parameters are estimated by formulating a constrained optimization problem with a sparsity regularization for the IC. This optimization problem is solved with a projection-based quasi-Newton algorithm. We investigate the sensitivity of our method to different algorithm parameters. We evaluate the performance of our method on both synthetic and clinical data. The latter comprises cases from the AD Neuroimaging Initiative (ADNI) datasets: 455 cognitively normal (CN), 212 mild cognitive impairment (MCI), and 45 AD subjects. We compare the performance of our approach to the commonly used Fisher-Kolmogorov (FK) model with a fixed IC at the entorhinal cortex (EC). Our method demonstrates an average improvement of 25.7% relative error compared to the FK model on the AD dataset. HFK also achieves an R-squared score of 0.664 for fitting AD data compared with 0.55 from FK model results under the same optimization scheme. Furthermore, for cases that have longitudinal data, we estimate a subject-specific AD onset time.

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