动员海洋生物多样性数据:意大利记录(软体动物)的一个新的软体学数据集。

IF 1 4区 环境科学与生态学 Q3 BIODIVERSITY CONSERVATION
Biodiversity Data Journal Pub Date : 2025-02-28 eCollection Date: 2025-01-01 DOI:10.3897/BDJ.12.e136243
Arianna Giannini, Massimo Appolloni, Luigi Romani, Marco Oliverio
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引用次数: 0

摘要

背景:地中海的地理位置和古海洋学历史使其成为生物多样性的热点地区,促使该地区开展了广泛的研究。然而,尽管该地区的海洋生物多样性得到了明显的广泛研究,但大量地中海分类群的分布数据仍未发表或分散在各种来源和格式中,严重限制了其潜在的再利用。对于高度生物多样性和被忽视的分类群,如无脊椎动物,这是一个特别棘手的问题。通过标准化和地理参考的过程动员这些冻结的数据可能会支持生物多样性的研究和保护。这项工作的目的是提供一个标准化的管道来整合这些分散的数据,重点关注地中海的意大利水域,并使用软体动物作为目标分类群。数据主要来自两个来源:出版的文献和自然历史收藏。协调过程包括三个关键步骤:1)术语和结构标准化;2)分类更新和3)地理参考。我们的努力产生了超过44000个来自意大利海水的软体动物物种的标准化记录。这些记录包括来自11个不同机构和私人收藏家拥有的新数字化标本的初级生物多样性数据,以及从311项已发表的研究中提取的次级生物多样性数据。新信息:这项工作是第一次尝试从自然历史收藏和文献中调动意大利海洋软体动物物种的可用分布信息,通过标准协议将检索到的数据转换为点发生记录,从而创建一个FAIR(可查找、可访问、可互操作和可重复使用)数据集,整理意大利海洋部门的这些记录。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Mobilising marine biodiversity data: a new malacological dataset of Italian records (Mollusca).

Background: The location and palaeoceanographic history of the Mediterranean Sea make it a biodiversity hotspot, prompting extensive studies in this region. However, despite the marine biodiversity of this area being apparently widely studied, a large amount of distributional data for Mediterranean taxa is still unpublished or scattered in various sources and formats, causing severe limitations to their potential reuse. This emerges as a particularly thorny issue for highly biodiverse and neglected taxa, such as invertebrates. The mobilisation of these frozen data through a process of standardisation and georeferencing could potentially support biodiversity research and conservation. The aim of this work is to provide a standardised pipeline to integrate these dispersed data, focusing on the Italian waters of the Mediterranean Sea and using molluscs as target taxa. Data were gathered from two main sources: published literature and Natural History Collections. The harmonisation process involved three key steps: 1) terminology and structure standardisation; 2) taxonomy updating and 3) georeferencing. Our efforts yielded over 44000 standardised records of mollusc species from Italian seawaters. These records encompassed primary biodiversity data from newly-digitised specimens owned by 11 different institutions and private collectors, as well as secondary biodiversity data extracted from 311 published studies.

New information: This work is the first attempt to mobilise the available distributional information of Italian marine mollusc species from Natural History Collections and literature, converting the retrieved data into point-occurrence records through standard protocols, thus creating a FAIR (Findable, Accessible, Interoperable and Reusable) dataset collating these records from Italian marine sectors.

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来源期刊
Biodiversity Data Journal
Biodiversity Data Journal Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
2.20
自引率
7.70%
发文量
283
审稿时长
6 weeks
期刊介绍: Biodiversity Data Journal (BDJ) is a community peer-reviewed, open-access, comprehensive online platform, designed to accelerate publishing, dissemination and sharing of biodiversity-related data of any kind. All structural elements of the articles – text, morphological descriptions, occurrences, data tables, etc. – will be treated and stored as DATA, in accordance with the Data Publishing Policies and Guidelines of Pensoft Publishers. The journal will publish papers in biodiversity science containing taxonomic, floristic/faunistic, morphological, genomic, phylogenetic, ecological or environmental data on any taxon of any geological age from any part of the world with no lower or upper limit to manuscript size.
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