基于无监督聚类的冠状动脉分割。

IF 4 3区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Belén Serrano-Antón, Manuel Insúa Villa, Santiago Pendón-Minguillón, Santiago Paramés-Estévez, Alberto Otero-Cacho, Diego López-Otero, Brais Díaz-Fernández, María Bastos-Fernández, José R González-Juanatey, Alberto P Muñuzuri
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引用次数: 0

摘要

背景:从ct冠状动脉造影(CTCA)中获取冠状动脉的三维几何形状对临床医生来说至关重要,可以实现病变的可视化并支持决策过程。人工分割冠状动脉既费时又容易出错。人们对自动分割算法的兴趣越来越大,特别是那些基于神经网络的算法,这需要大量的数据集和大量的计算资源来进行训练。本文提出了一种基于聚类算法和图结构的自动分割方法,该方法将聚类过程数据和原始图像数据相结合。结果:该研究比较了两种方法:使用轴向、矢状面和冠状面切片的2.5D版本(3Axis)和垂直版本(Perp),使用每条血管的横截面。该方法在两组患者中进行了测试:一组为10名患者,另一组为22名临床诊断病变的患者。3Axis方法在测试集中的Dice得分为0.88,病变集中的Dice得分为0.83,而Perp方法在测试集中的Dice得分为0.81,病变集中的Dice得分为0.82,病变区域的Dice得分分别降至0.79和0.80。这些结果与目前最先进的方法相比具有竞争力。结论:这种基于聚类的分割方法提供了一个强大的框架,可以很容易地集成到临床工作流程中,提高冠状动脉分析的准确性和效率。此外,从任何横截面上可视化聚类和图形的能力增强了该方法的可解释性,为临床医生提供了对血管结构更深入的了解。该研究证明了聚类算法在提高冠状动脉成像分割性能方面的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Unsupervised clustering based coronary artery segmentation.

Background: The acquisition of 3D geometries of coronary arteries from computed tomography coronary angiography (CTCA) is crucial for clinicians, enabling visualization of lesions and supporting decision-making processes. Manual segmentation of coronary arteries is time-consuming and prone to errors. There is growing interest in automatic segmentation algorithms, particularly those based on neural networks, which require large datasets and significant computational resources for training. This paper proposes an automatic segmentation methodology based on clustering algorithms and a graph structure, which integrates data from both the clustering process and the original images.

Results: The study compares two approaches: a 2.5D version using axial, sagittal, and coronal slices (3Axis), and a perpendicular version (Perp), which uses the cross-section of each vessel. The methodology was tested on two patient groups: a test set of 10 patients and an additional set of 22 patients with clinically diagnosed lesions. The 3Axis method achieved a Dice score of 0.88 in the test set and 0.83 in the lesion set, while the Perp method obtained Dice scores of 0.81 in the test set and 0.82 in the lesion set, decreasing to 0.79 and 0.80 in the lesion region, respectively. These results are competitive with current state-of-the-art methods.

Conclusions: This clustering-based segmentation approach offers a robust framework that can be easily integrated into clinical workflows, improving both accuracy and efficiency in coronary artery analysis. Additionally, the ability to visualize clusters and graphs from any cross-section enhances the method's explainability, providing clinicians with deeper insights into vascular structures. The study demonstrates the potential of clustering algorithms for improving segmentation performance in coronary artery imaging.

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来源期刊
Biodata Mining
Biodata Mining MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
7.90
自引率
0.00%
发文量
28
审稿时长
23 weeks
期刊介绍: BioData Mining is an open access, open peer-reviewed journal encompassing research on all aspects of data mining applied to high-dimensional biological and biomedical data, focusing on computational aspects of knowledge discovery from large-scale genetic, transcriptomic, genomic, proteomic, and metabolomic data. Topical areas include, but are not limited to: -Development, evaluation, and application of novel data mining and machine learning algorithms. -Adaptation, evaluation, and application of traditional data mining and machine learning algorithms. -Open-source software for the application of data mining and machine learning algorithms. -Design, development and integration of databases, software and web services for the storage, management, retrieval, and analysis of data from large scale studies. -Pre-processing, post-processing, modeling, and interpretation of data mining and machine learning results for biological interpretation and knowledge discovery.
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