上皮-间质转化群体动力学的综合表型结构偏微分方程模型。

IF 3.5 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Jules Guilberteau, Paras Jain, Mohit Kumar Jolly, Camille Pouchol, Nastassia Pouradier Duteil
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引用次数: 0

摘要

上皮-间质(E-M)轴的表型异质性有助于癌症转移和耐药。最近的实验工作整理了细胞群体中E-M异质性出现和动态的详细时间过程数据。然而,目前尚不清楚不同的细胞内和细胞间过程如何塑造E-M异质性的动力学。在这里,使用细胞种群平衡模型,我们捕获了细胞密度沿着E-M表型轴的动态,这是由(a)生物分子之间的细胞内调节相互作用,(b)细胞分裂和死亡以及(c)随机细胞状态转换之间的相互作用造成的。我们发现,虽然E-M异质性的存在取决于细胞内调控,但异质性随着细胞状态的随机转变而增强,并因生长速率的差异而减弱。此外,E-M细胞之间的资源竞争可能导致种群的双期生长和/或表型组成的双期稳定。总的来说,我们的模型强调了形成E-M异质性动态模式的细胞过程之间复杂的相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An integrative phenotype-structured partial differential equation model for the population dynamics of epithelial-mesenchymal transition.

Phenotypic heterogeneity along the epithelial-mesenchymal (E-M) axis contributes to cancer metastasis and drug resistance. Recent experimental efforts have collated detailed time-course data on the emergence and dynamics of E-M heterogeneity in a cell population. However, it remains unclear how different intra- and inter-cellular processes shape the dynamics of E-M heterogeneity. Here, using Cell Population Balance model, we capture the dynamics of cell density along E-M phenotypic axis resulting from interplay between-(a) intracellular regulatory interaction among biomolecules, (b) cell division and death and (c) stochastic cell-state transition. We find that while the existence of E-M heterogeneity depends on intracellular regulation, heterogeneity gets enhanced with stochastic cell-state transitions and diminished by growth rate differences. Further, resource competition among E-M cells can lead to both bi-phasic growth of the total population and/or bi-stability in the phenotypic composition. Overall, our model highlights complex interplay between cellular processes shaping dynamic patterns of E-M heterogeneity.

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来源期刊
NPJ Systems Biology and Applications
NPJ Systems Biology and Applications Mathematics-Applied Mathematics
CiteScore
5.80
自引率
0.00%
发文量
46
审稿时长
8 weeks
期刊介绍: npj Systems Biology and Applications is an online Open Access journal dedicated to publishing the premier research that takes a systems-oriented approach. The journal aims to provide a forum for the presentation of articles that help define this nascent field, as well as those that apply the advances to wider fields. We encourage studies that integrate, or aid the integration of, data, analyses and insight from molecules to organisms and broader systems. Important areas of interest include not only fundamental biological systems and drug discovery, but also applications to health, medical practice and implementation, big data, biotechnology, food science, human behaviour, broader biological systems and industrial applications of systems biology. We encourage all approaches, including network biology, application of control theory to biological systems, computational modelling and analysis, comprehensive and/or high-content measurements, theoretical, analytical and computational studies of system-level properties of biological systems and computational/software/data platforms enabling such studies.
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