PhaSeDis:一个人工整理的相分离-疾病关联和相应小分子数据库。

Taoyu Chen, Guoguo Tang, Tianhao Li, Zhining Yanghong, Chao Hou, Zezhou Du, Kaiqiang You, Liwei Ma, Tingting Li
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引用次数: 0

摘要

生物大分子通过液-液相分离形成无膜细胞器,以调节特定生化反应的效率。相分离的失调可能导致生物分子的病理凝聚或隔离,从而导致疾病。因此,相分离和相分离因子可作为疾病治疗的药物靶点。然而,这些关联尚未被纳入相分离相关数据库。因此,基于本实验室先前开发的无膜细胞器因子-疾病关联数据库MloDisDB,我们构建了相分离-疾病关联数据库PhaSeDis。我们将相分离条目从52条增加到185条,并补充了原文提供的证据,验证了各因素的相分离性质。此外,我们还包括了与低通量或高通量证据相互作用的小分子的信息,这些小分子可能作为相分离入口的潜在药物。PhaSeDis致力于提供每个入口的全面描述,阐明相分离因素如何通过相分离诱导病理条件以及小分子干预的机制。我们相信PhaSeDis在相分离调控在相关疾病治疗中的应用具有重要意义。PhaSeDis可在http://mlodis.phasep.pro上获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
PhaSeDis: A Manually Curated Database of Phase Separation-Disease Associations and Corresponding Small Molecules.

Biomacromolecules form membraneless organelles through liquid-liquid phase separation in order to regulate the efficiency of particular biochemical reactions. Dysregulation of phase separation might result in pathological condensation or sequestration of biomolecules, leading to diseases. Thus, phase separation and phase separating factors may serve as drug targets for disease treatment. Nevertheless, such associations have not yet been integrated into phase separation related databases. Therefore, based on MloDisDB, a database for membraneless organelle factor-disease association previously developed by our lab, we constructed PhaSeDis, the phase separation-disease association database. We increased the number of phase separation entries from 52 to 185, and supplemented the evidence provided by the original article verifying the phase separation nature of the factors. Moreover, we included the information of interacting small molecules with low-throughput or high-throughput evidence that might serve as potential drugs for phase separation entries. PhaSeDis strives to offer comprehensive descriptions of each entry, elucidating how phase separating factors induce pathological conditions via phase separation and the mechanisms by which small molecules intervene. We believe that PhaSeDis would be very important in the application of phase separation regulation in treating related diseases. PhaSeDis is available at http://mlodis.phasep.pro.

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