C2P-GCN:用于结直肠癌分级的细胞-斑块图卷积网络。

Sudipta Paul, Bulent Yener, Amanda W Lund
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引用次数: 0

摘要

基于图的学习方法,由于其编码组织/器官结构信息的能力,越来越受到结直肠癌组织学图像分级的青睐。最近的基于图的技术包括将整个幻灯片图像(wsi)划分为较小或中等大小的块,然后在每个块上构建图以直接用于训练。然而,这种方法无法捕获整个WSI中存在的组织结构信息,并且依赖于来自大量图像补丁数据集的训练。在本文中,我们提出了一种新颖的细胞到补丁图卷积网络(C2P-GCN),这是一种基于两阶段图形成的方法。在第一阶段,它根据WSI的每个补丁上的细胞组织形成一个补丁级图。第二阶段,基于WSI补丁之间的相似性度量,将每个补丁视为图的一个节点,形成图像级图。然后将此图表示输入到基于gcn的多层分类网络中。我们的方法,通过双相图构建,有效地从单个斑块中收集局部结构细节,并在WSI上的所有斑块之间建立有意义的连接。由于C2P-GCN将整个WSI的结构数据集成到单个图中,因此与最新的结直肠癌模型相比,它允许我们的模型使用更少的训练数据。C2P-GCN在两个不同的结直肠癌数据集上的实验验证证明了我们的方法的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
C2P-GCN: Cell-to-Patch Graph Convolutional Network for Colorectal Cancer Grading.

Graph-based learning approaches, due to their ability to encode tissue/organ structure information, are increasingly favored for grading colorectal cancer histology images. Recent graph-based techniques involve dividing whole slide images (WSIs) into smaller or medium-sized patches, and then building graphs on each patch for direct use in training. This method, however, fails to capture the tissue structure information present in an entire WSI and relies on training from a significantly large dataset of image patches. In this paper, we propose a novel cell-to-patch graph convolutional network (C2P-GCN), which is a two-stage graph formation-based approach. In the first stage, it forms a patch-level graph based on the cell organization on each patch of a WSI. In the second stage, it forms an image-level graph based on a similarity measure between patches of a WSI considering each patch as a node of a graph. This graph representation is then fed into a multi-layer GCN-based classification network. Our approach, through its dual-phase graph construction, effectively gathers local structural details from individual patches and establishes a meaningful connection among all patches across a WSI. As C2P-GCN integrates the structural data of an entire WSI into a single graph, it allows our model to work with significantly fewer training data compared to the latest models for colorectal cancer. Experimental validation of C2P-GCN on two distinct colorectal cancer datasets demonstrates the effectiveness of our method.

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