岛屿的大小决定了一个大物种的基因组多样性。

IF 2.8 2区 生物学 Q2 BIOLOGY
Biology Letters Pub Date : 2025-03-01 Epub Date: 2025-03-05 DOI:10.1098/rsbl.2024.0692
Ethan F Gyllenhaal, Michael J Andersen, Robert G Moyle, Joseph D Manthey
{"title":"岛屿的大小决定了一个大物种的基因组多样性。","authors":"Ethan F Gyllenhaal, Michael J Andersen, Robert G Moyle, Joseph D Manthey","doi":"10.1098/rsbl.2024.0692","DOIUrl":null,"url":null,"abstract":"<p><p>Islands have long represented natural laboratories for studying many aspects of ecology and evolutionary biology, from speciation to community assembly. One aspect that has been well documented is the correlation between island size and taxonomic diversity, likely due to decreased complexity and population size on small islands. This same logic can apply to genetic diversity, which should predictably decrease with effective population size. The island size-diversity correlation has received support over the years but often focuses on single metrics of genetic diversity. Here, we use <i>Zosterops</i> white-eyes in the Solomon Islands to study the correlation between island size and various metrics related to genetic diversity, including runs of homozygosity and fixation of transposable elements. We find that almost all these metrics strongly correlate with island size, and in turn with each other. We infer that island size is independently correlated with these different variables, demonstrating that population size impacts genomic metrics of diversity in a variety of ways across temporal and hierarchical scales.</p>","PeriodicalId":9005,"journal":{"name":"Biology Letters","volume":"21 3","pages":"20240692"},"PeriodicalIF":2.8000,"publicationDate":"2025-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11879625/pdf/","citationCount":"0","resultStr":"{\"title\":\"Island size shapes genomic diversity in a great speciator (Aves: <i>Zosterops</i>).\",\"authors\":\"Ethan F Gyllenhaal, Michael J Andersen, Robert G Moyle, Joseph D Manthey\",\"doi\":\"10.1098/rsbl.2024.0692\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Islands have long represented natural laboratories for studying many aspects of ecology and evolutionary biology, from speciation to community assembly. One aspect that has been well documented is the correlation between island size and taxonomic diversity, likely due to decreased complexity and population size on small islands. This same logic can apply to genetic diversity, which should predictably decrease with effective population size. The island size-diversity correlation has received support over the years but often focuses on single metrics of genetic diversity. Here, we use <i>Zosterops</i> white-eyes in the Solomon Islands to study the correlation between island size and various metrics related to genetic diversity, including runs of homozygosity and fixation of transposable elements. We find that almost all these metrics strongly correlate with island size, and in turn with each other. We infer that island size is independently correlated with these different variables, demonstrating that population size impacts genomic metrics of diversity in a variety of ways across temporal and hierarchical scales.</p>\",\"PeriodicalId\":9005,\"journal\":{\"name\":\"Biology Letters\",\"volume\":\"21 3\",\"pages\":\"20240692\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11879625/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biology Letters\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1098/rsbl.2024.0692\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/3/5 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biology Letters","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1098/rsbl.2024.0692","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/5 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

长期以来,岛屿一直是研究生态学和进化生物学的许多方面,从物种形成到群落聚集的天然实验室。一个已被充分记录的方面是岛屿大小和分类多样性之间的相关性,可能是由于小岛屿上的复杂性和人口规模降低。同样的逻辑也适用于遗传多样性,它应该可以预见地随着有效种群规模的减少而减少。岛屿大小-多样性相关性多年来得到了支持,但往往侧重于遗传多样性的单一指标。在这里,我们使用所罗门群岛的Zosterops白眼来研究岛屿大小与遗传多样性相关的各种指标之间的相关性,包括纯合子的运行和转座因子的固定。我们发现,几乎所有这些指标都与岛屿大小密切相关,彼此之间也相互关联。我们推断,岛屿大小与这些不同的变量独立相关,表明种群大小在不同的时间和层次尺度上以各种方式影响多样性的基因组指标。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Island size shapes genomic diversity in a great speciator (Aves: Zosterops).

Islands have long represented natural laboratories for studying many aspects of ecology and evolutionary biology, from speciation to community assembly. One aspect that has been well documented is the correlation between island size and taxonomic diversity, likely due to decreased complexity and population size on small islands. This same logic can apply to genetic diversity, which should predictably decrease with effective population size. The island size-diversity correlation has received support over the years but often focuses on single metrics of genetic diversity. Here, we use Zosterops white-eyes in the Solomon Islands to study the correlation between island size and various metrics related to genetic diversity, including runs of homozygosity and fixation of transposable elements. We find that almost all these metrics strongly correlate with island size, and in turn with each other. We infer that island size is independently correlated with these different variables, demonstrating that population size impacts genomic metrics of diversity in a variety of ways across temporal and hierarchical scales.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biology Letters
Biology Letters 生物-进化生物学
CiteScore
5.50
自引率
3.00%
发文量
164
审稿时长
1.0 months
期刊介绍: Previously a supplement to Proceedings B, and launched as an independent journal in 2005, Biology Letters is a primarily online, peer-reviewed journal that publishes short, high-quality articles, reviews and opinion pieces from across the biological sciences. The scope of Biology Letters is vast - publishing high-quality research in any area of the biological sciences. However, we have particular strengths in the biology, evolution and ecology of whole organisms. We also publish in other areas of biology, such as molecular ecology and evolution, environmental science, and phylogenetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信