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引用次数: 0
摘要
脑肿瘤涉及脑组织内或脑组织附近的异常细胞生长,需要精确的分割以进行有效的临床决策。传统模型在准确描绘肿瘤区域方面经常面临挑战,而为高分辨率MRI数据建立鲁棒分割模型需要大量的计算能力。本研究提出了一种具有挤压和激励(SE)模块的三维U-Net架构,称为SE- 3d Brain Net,以增强多区域脑肿瘤分割。该模型利用SE模块重新校准通道特征显著性,提高跨肿瘤子区域的分割精度。在BraTS 2018和BraTS 2020等数据集上进行的大量实验表明,该模型优于传统的U-Net模型和各种先进方法,增强肿瘤的平均Dice分数为0.86,肿瘤核心的平均Dice分数为0.84,整个肿瘤分割的平均Dice分数为0.86。一项消融研究进一步揭示了该模型对超参数的敏感性,确定了批量大小、学习率和辍学率的最佳设置。这项研究证明了深度学习在准确识别脑肿瘤方面的有效性,强调了它在显著改善医学图像分析和患者预后方面的潜力。
Three-Dimensional Network With Squeeze and Excitation for Accurate Multi-Region Brain Tumor Segmentation
Brain tumors involve abnormal cell growth within or adjacent to brain tissues, necessitating precise segmentation for effective clinical decision-making. Traditional models often face challenges in accurately delineating tumor regions, and building robust segmentation models for high-resolution MRI data requires substantial computational power. This study presents a three-dimensional U-Net architecture with Squeeze and Excitation (SE) modules, called SE-3D Brain Net, to enhance multi-region brain tumor segmentation. The model leverages SE modules to recalibrate channel-wise feature significance, improving segmentation accuracy across tumor subregions. Extensive experiments on datasets such as BraTS 2018 and BraTS 2020 demonstrate that the model outperforms traditional U-Net models and various advanced methods, achieving average Dice scores of 0.86 for enhancing tumor, 0.84 for tumor core, and 0.86 for whole tumor segmentation. An ablation study further revealed the model's sensitivity to hyperparameters, identifying optimal settings for batch size, learning rate, and dropout rate. This study demonstrates the effectiveness of deep learning in accurately identifying brain tumors, emphasizing its potential to improve medical image analysis and patient outcomes significantly.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.