“码头工作”橙:柑橘香气对大象交通威慑的双受体生化理论是保护工作的核心。

IF 2.3 Q3 BIOCHEMICAL RESEARCH METHODS
Bioinformatics and Biology Insights Pub Date : 2025-02-28 eCollection Date: 2025-01-01 DOI:10.1177/11779322251315922
Dilantha Gunawardana
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引用次数: 0

摘要

大象的保护需要物理、化学和生物的方法来确保这些巨大的厚皮动物得到保护。其中一种方法是使用橙色植物(作为生物围栏)来驱赶大象,从而避免了与大象侵入人类栖息地有关的灾难性事件。大象利用g蛋白偶联受体(gpcr)对植物挥发性化合物的觅食和其他行为具有敏感的嗅觉辨别能力。然而,这两个受体是A2A和A2B受体,它们介导由一系列配体引起的嗅觉,包括柠檬烯,柑橘植物中主要的挥发性化合物,被假设为主要的驱避剂。利用蛋白和mRNA水平的生物信息学(BLAST/Multiple Sequence Alignments)方法探索A2B受体的多种表达产物,即由多个甲硫氨酸翻译的异构体mRNA产生的全长和短切蛋白,同时比较人和大象A2B受体柠檬烯结合囊和预测服务器[Netphos 3.1;proteter]分别用于关注柠檬烯结合所需的接触和涉及细胞信号传导的翻译后修饰。最后,通过考虑大象优先觅食或避免作为觅食行为的一部分的树木上的柠檬烯含量,探讨了柠檬烯与拒食行为之间的联系。非洲丛林象(Loxodonta africana)具有全长A2A受体,但与大多数哺乳动物不同,它表达高度截断的A2B受体异构体,仅具有跨膜螺旋5、6和7。截断可能导致嗅觉界面/通路中A2B受体的流量和表达增加,并有助于增强激活。此外,假定的柠檬烯结合裂缝中的所有残基在人类和非洲丛林象A2B受体之间都是完全保守的,无论是全长还是截断。浅激活位点需要微摩尔亲和力和较少的侧链相互作用,这被推测为截断的A2B受体的情况。n末端n糖基化基序表明截断的A2B受体在精确折叠后的膜定位。截断、插入、替换和转录异构体的组合在非洲L. A2B受体的进化中起着重要作用,其中柠檬烯的接受性可能是关键。本文还推断了柠檬烯是如何作为一种通才食草动物的饮食驱虫剂/拒食剂的,因为在一些饮食中,包括标志性的硬核虫(Sclerocarya birrea)中没有柠檬烯含量。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A "Dock-Work" Orange: A Dual-Receptor Biochemical Theory on the Deterrence Induced by Citrusy Aroma on Elephant Traffic Central to a Conservation Effort.

Conservation of elephants requires physical, chemical, and biological approaches to ensure the protection of these gargantuan pachyderms. One such approach is using orange plants (as biofencing) for the repellence of elephants, which precludes catastrophic events related to the encroachment of elephants into human habitats. Elephants have sensitive olfactory discrimination of plant volatile compounds for foraging and other behavior using G-protein-coupled receptors (GPCRs). However, 2 such receptors are the A2A and A2B receptors mediating olfaction elicited by a host of ligands, including limonene, the main volatile compound in citrus plants, which is hypothesized to be the chief repelling agent. Bioinformatics at the protein and mRNA levels (BLAST/Multiple Sequence Alignments) were employed to explore the multiple expression products of A2B receptors, namely full-length and truncated proteins produced by isoform mRNAs translated from multiple methionines, while the comparison of the limonene-binding pockets of human and elephant A2B receptors and prediction servers [Netphos 3.1; Protter] was used to focus, respectively, on the contacts limonene binding entails and the post-translational modifications that are involved in cell signaling. Finally, the link between limonene and antifeedant activity was explored by considering limonene content on trees that are preferentially foraged or avoided as part of the feeding behavior by elephants. The African bush elephant (Loxodonta africana) possesses a full-length A2A receptor but unlike most mammals, expresses a highly truncated A2B receptor isoform possessing only transmembrane helices 5, 6, and 7. Truncation may lead to higher traffic and expression of the A2B receptor in olfactory interfaces/pathways and aid stronger activation. In addition, all residues in the putative limonene-binding cleft are perfectly conserved between the human and African bush elephant A2B receptors, both full length and truncated. Shallow activation sites require micromolar affinity and fewer side-chain interactions, which is speculated to be the case for the truncated A2B receptor. An N-terminal extremity N-glycosylation motif is indicative of membrane localization of the truncated A2B receptor following accurate folding. A combination of truncation, indels, substitutions, and transcript isoforms are the attributed roles in the evolution of the L. africana A2B receptor, out of which limonene receptivity may be the key. It is also inferred how limonene may act as a dietary repellent/antifeedant to a generalist herbivore, with the documented limonene content being absent in some dietary favorites including the iconic Sclerocarya birrea.

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来源期刊
Bioinformatics and Biology Insights
Bioinformatics and Biology Insights BIOCHEMICAL RESEARCH METHODS-
CiteScore
6.80
自引率
1.70%
发文量
36
审稿时长
8 weeks
期刊介绍: Bioinformatics and Biology Insights is an open access, peer-reviewed journal that considers articles on bioinformatics methods and their applications which must pertain to biological insights. All papers should be easily amenable to biologists and as such help bridge the gap between theories and applications.
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