ETDformer:一种有效的分割颅内出血的变压器块。

IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Wanyuan Gong, Yanmin Luo, Fuxing Yang, Huabiao Zhou, Zhongwei Lin, Chi Cai, Youcao Lin, Junyan Chen
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引用次数: 0

摘要

脑出血医学图像分割在临床诊断和治疗规划中起着至关重要的作用。U-Net架构以其编码器-解码器设计和跳过连接而闻名,被广泛使用,但通常难以准确描绘ICH区域等复杂结构。最近,变压器模型已被纳入医学图像分割,通过捕获远程依赖关系来提高性能。然而,现有的方法在分割非目标区域和保留目标区域的详细信息方面仍然面临着挑战。为了解决这些问题,我们提出了一种新的分割模型,该模型将U-Net的局部特征提取与变压器的全局感知相结合。我们的方法引入了外部存储模块(ES Module)来捕获和存储相邻切片之间的特征相似性,并引入了自上而下的注意力(tdatattention)机制来关注相关病变区域,同时增强目标边界分割。此外,我们引入边界DoU损失来改善病变边界的划定。对福建医科大学第二附属医院颅内出血数据集(IHSAH)和公开的脑出血分割数据集(BHSD)的评估表明,我们的方法在IHSAH和BHSD数据集上的DSC得分分别为91.29%和85.10%,比第二好的级联MERIT分别高出2.19%和2.05%。此外,我们的方法增强了病变细节的可视化,极大地帮助了诊断的准确性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
ETDformer: an effective transformer block for segmentation of intracranial hemorrhage.

Intracerebral hemorrhage (ICH) medical image segmentation plays a crucial role in clinical diagnostics and treatment planning. The U-Net architecture, known for its encoder-decoder design and skip connections, is widely used but often struggles with accurately delineating complex struct ures like ICH regions. Recently, transformer models have been incorporated into medical image segmentation, improving performance by capturing long-range dependencies. However, existing methods still face challenges in incorrectly segmenting non-target areas and preserving detailed information in the target region. To address these issues, we propose a novel segmentation model that combines U-Net's local feature extraction with the transformer's global perceptiveness. Our method introduces an External Storage Module (ES Module) to capture and store feature similarities between adjacent slices, and a Top-Down Attention (TDAttention) mechanism to focus on relevant lesion regions while enhancing target boundary segmentation. Additionally, we introduce a boundary DoU loss to improve lesion boundary delineation. Evaluations on the intracranial hemorrhage dataset (IHSAH) from the Second Affiliated Hospital of Fujian Medical University, as well as the publicly available Brain Hemorrhage Segmentation Dataset (BHSD), demonstrate that our approach achieves DSC scores of 91.29% and 85.10% on the IHSAH and BHSD datasets, respectively, outperforming the second-best Cascaded MERIT by 2.19% and 2.05%, respectively. Moreover, our method provides enhanced visualization of lesion details, significantly aiding diagnostic accuracy.

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来源期刊
Medical & Biological Engineering & Computing
Medical & Biological Engineering & Computing 医学-工程:生物医学
CiteScore
6.00
自引率
3.10%
发文量
249
审稿时长
3.5 months
期刊介绍: Founded in 1963, Medical & Biological Engineering & Computing (MBEC) continues to serve the biomedical engineering community, covering the entire spectrum of biomedical and clinical engineering. The journal presents exciting and vital experimental and theoretical developments in biomedical science and technology, and reports on advances in computer-based methodologies in these multidisciplinary subjects. The journal also incorporates new and evolving technologies including cellular engineering and molecular imaging. MBEC publishes original research articles as well as reviews and technical notes. Its Rapid Communications category focuses on material of immediate value to the readership, while the Controversies section provides a forum to exchange views on selected issues, stimulating a vigorous and informed debate in this exciting and high profile field. MBEC is an official journal of the International Federation of Medical and Biological Engineering (IFMBE).
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