阴离子促进氢-氘交换作为探测弱阴离子-蛋白质相互作用的工具,负责霍夫迈斯特效应

IF 2.9 2区 化学 Q3 CHEMISTRY, PHYSICAL
Thien H. Tran, Meghan Ricciardi, Lilly I. Grunski, William C. Wimley, Marcey L. Waters and Bruce C. Gibb*, 
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引用次数: 0

摘要

由于蛋白质结构的复杂性和所涉及的非共价相互作用的非常弱的性质,阴离子在蛋白质和肽中诱导霍夫迈斯特盐效应的详细机制仍然不清楚。本文以β-发夹肽为模型,研究了两种确定(映射)阴离子结合的方法:1H NMR化学位移和氢催化氢氘交换(HDX)速率变化。我们证明了所研究的每种盐──尽管亲和力太弱而无法准确量化,但它们在一定程度上引起了肽和阴离子特异性的变性,更多的电荷扩散阴离子诱导了更大程度的展开。我们的研究表明,HDX测绘比化学位移数据提供了更多的细节。因此,HDX映射揭示了两种略有不同的变性机制,这取决于阴离子的性质。也就是说,在n端精氨酸残基的辅助下,电荷密集的Cl -被发夹末端的N-H基团螯合,引起小程度的变性,而电荷扩散的阴离子则深入到肽的阳离子-π-疏水核心,引起更大程度的展开。这些发现提供了阴离子在多肽和蛋白质中诱导盐入霍夫迈斯特效应的不同机制的一瞥,并表明HDX是绘制弱阴离子结合的有用工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Anion-Facilitated Hydrogen–Deuterium Exchange as a Tool to Probe Weak Anion–Protein Interactions Responsible for Hofmeister Effects

Impeded by the complexity of proteinaceous structure and the very weak nature of the noncovalent interactions involved, the detailed mechanisms by which anions induce salting-in Hofmeister effects in proteins and peptides remain unclear. Here, using β-hairpin peptides as models, we examine two approaches to qualify (map) anion binding: 1H NMR chemical shifts and hydronium-catalyzed hydrogen–deuterium exchange (HDX) rate changes. We demonstrate that each salt investigated─despite an affinity too weak to quantify accurately, caused denaturation to an extent that is both peptide and anion-specific, with more charge-diffuse anions inducing a greater degree of unfolding. Our studies reveal that the HDX mapping provides more detail than chemical shift data. Thus, HDX mapping reveals two slightly different mechanisms of denaturation, depending on the nature of the anion. Namely, assisted by a N-terminal Arg residue, charge-dense Cl is chelated by the terminal N–H groups of the hairpin and induces a small degree of denaturation, whereas charge-diffuse anions intercalate deeply into the cation-π-hydrophobic core of the peptide and induce more substantial unfolding. These findings provide a glimpse of the different mechanisms by which anions can induce the salting-in Hofmeister effect in peptides and proteins and suggest HDX as a useful tool to map weak anion binding.

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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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