靶向治疗肿瘤和免疫疾病的白细胞介素2诱导t细胞激酶(ITK):潜在的下一代ITK抑制剂。

IF 2.2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Omics A Journal of Integrative Biology Pub Date : 2025-03-01 Epub Date: 2025-02-19 DOI:10.1089/omi.2024.0207
Shazia Ahmed, Mohammad Umar Saeed, Arunabh Choudhury, Taj Mohammad, Afzal Hussain, Mohamed F AlAjmi, Dharmendra Kumar Yadav, Md Imtaiyaz Hassan
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引用次数: 0

摘要

白细胞介素2诱导型T细胞激酶(interleukin -2 inducible T-cell kinase, ITK)是一种重要的酪氨酸激酶,参与T细胞的活化和分化。ITK主要存在于T细胞中,在控制T细胞受体信号转导及下游通路中发挥重要作用。ITK调节细胞因子的合成,特别是白细胞介素-2 (IL-2)和Th2细胞的发育。ITK对免疫学、自身免疫性疾病和癌症的药物发现和分子靶向很有兴趣。在这里,我们报告了一种基于结构的虚拟筛选,利用从PubChem数据库获得的小分子集合,着眼于发现靶向ITK的药物。这些化合物是根据利宾斯基的五法则选择的。分子对接研究的重点是优先结合亲和力和对激酶结构域的特异性相互作用。对排名最高的搜索结果进行了可能的泛分析干扰化合物(PAINS)鉴定、药代动力学性质评估和物质活性谱预测(PASS)分析的药理活性估计。这些化学物质之间的相互作用和显著残基在白细胞介素-2诱导的t细胞激酶(ITK)激酶结构域使用二维方法解包。参考抑制剂ITK- inhibitor2 (IMM)和4个PubChem CIDs化合物90442621 (PFB)、141764004 (FTP)、149213796 (FPP)和145983307 (MBD)的结合亲和力分别为-8、-10.4、-9.8、-10.2和-10.7 kcal/mol,对ITK结合袋具有很高的选择性。总之,本研究报告了几种化合物治疗ITK的潜力。此外,结构分析显示,所提出的化合物与atp结合口袋内活性位点残基的相互作用与已知抑制剂高度相似,但具有不同的相互作用模式,可以提高特异性。这种特异性和优化具有开发下一代ITK抑制剂的潜力,可能应用于治疗免疫相关疾病和癌症。需要进一步的体外、体内和转化临床研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Therapeutic Targeting of Interleukin-2-Inducible T-Cell Kinase (ITK) for Cancer and Immunological Disorders: Potential Next-Generation ITK Inhibitors.

Interleukin-2-inducible T-cell kinase (ITK) is a critical tyrosine kinase enzyme that is involved in the activation and differentiation of T cells. ITK is mainly found in T cells, which plays an essential role in controlling T-cell receptor signaling and downstream pathways. ITK regulates the synthesis of cytokines, particularly interleukin-2 (IL-2), and the development of Th2 cells. ITK is of interest for drug discovery and molecular targeting in immunology, autoimmune diseases, and cancer. Here, we report a structure-based virtual screening utilizing a collection of small molecules obtained from the PubChem database with an eye on the discovery of drugs targeting ITK. The compounds were selected according to compliance with the Lipinski's rule of five. The molecular docking investigation focused on prioritizing binding affinity and specific interaction toward the kinase domain. The highest-ranking search results were subjected to identification of possible pan-assay interference compounds (PAINS), assessment of pharmacokinetic properties, and estimation of pharmacological activity using Prediction of Activity Spectra of Substances (PASS) analysis. The interactions among these chemicals and the salient residues in the interleukin-2-inducible T-cell kinase (ITK) kinase domain were unpacked using a two-dimensional approach. The reference inhibitor ITK-Inhibitor-2 (IMM) and four elucidated compounds with PubChem CIDs, namely, 90442621 (PFB), 141764004 (FTP), 149213796 (FPP), and 145983307 (MBD), showed significant binding affinity of -8, -10.4, -9.8, -10.2, and -10.7 kcal/mol, respectively, and high selectivity for the ITK binding pocket. In conclusion, this study reports on the potential of several compounds for therapeutic targeting of ITK. Furthermore, structural analysis revealed the interaction of proposed compounds and active site residues within the ATP-binding pocket is highly similar to known inhibitors but shares distinct interaction patterns that could improve specificity. This specificity and optimization hold potential for the development of next-generation ITK inhibitors with possible applications in the treatment of immune-related disorders and cancers. Further in vitro, in vivo, and translational clinical research are called for.

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来源期刊
Omics A Journal of Integrative Biology
Omics A Journal of Integrative Biology 生物-生物工程与应用微生物
CiteScore
6.00
自引率
12.10%
发文量
62
审稿时长
3 months
期刊介绍: OMICS: A Journal of Integrative Biology is the only peer-reviewed journal covering all trans-disciplinary OMICs-related areas, including data standards and sharing; applications for personalized medicine and public health practice; and social, legal, and ethics analysis. The Journal integrates global high-throughput and systems approaches to 21st century science from “cell to society” – seen from a post-genomics perspective.
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