RPA(D)和HRPA(D):计算游离氨基酸残基的NMR自旋-自旋耦合常数。

IF 1.9 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Christoffer H. S. Møller, Stephan P. A. Sauer
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引用次数: 0

摘要

在追求计算成本低、精度高的计算方法的过程中,soppa衍生的RPA(D)和HRPA(D)方法有很大的发展前景。本研究旨在通过计算游离氨基酸残基主链结构的NMR自旋-自旋耦合常数,进一步对这两种方法进行基准测试,并与原有的SOPPA方法和CCSD方法进行比较。基于一个小的基集研究,发现这些方法的相对性能并不严重依赖于基集的大小。HRPA(D)对SOPPA结果的再现精度较高,而RPA(D)对CCSD单键偶联常数的再现精度高于HRPA(D)和SOPPA。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

RPA(D) and HRPA(D): Calculating NMR Spin–Spin Coupling Constants in Free Amino Acid Residues

RPA(D) and HRPA(D): Calculating NMR Spin–Spin Coupling Constants in Free Amino Acid Residues

In the pursuit of computational methods which boast both low computational cost and a high degree of accuracy, the SOPPA-derived methods RPA(D) and HRPA(D) are showing great promise. This study aims to further the benchmarking of these two methods in comparison with both the original SOPPA and the CCSD method by calculating NMR spin–spin coupling constants in the backbone structure of free amino acid residues. Based on a small basis set study, the relative performance of the methods was not found to be heavily dependent on the size of the basis set. While HRPA(D) was found to reproduce the SOPPA results to a consistently high degree of accuracy, RPA(D) reproduced the CCSD results for the one-bond coupling constants more accurately than both HRPA(D) and SOPPA.

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来源期刊
CiteScore
4.70
自引率
10.00%
发文量
99
审稿时长
1 months
期刊介绍: MRC is devoted to the rapid publication of papers which are concerned with the development of magnetic resonance techniques, or in which the application of such techniques plays a pivotal part. Contributions from scientists working in all areas of NMR, ESR and NQR are invited, and papers describing applications in all branches of chemistry, structural biology and materials chemistry are published. The journal is of particular interest not only to scientists working in academic research, but also those working in commercial organisations who need to keep up-to-date with the latest practical applications of magnetic resonance techniques.
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